Evidence map›Paper›PMID 31730923›Full record

ArticleNeuroImage2020

Multi-band SWIFT enables quiet and artefact-free EEG-fMRI and awake fMRI studies in rat.

Jaakko Paasonen, Hanne Laakso, Tiina Pirttimäki, Petteri Stenroos, Raimo A Salo, Ekaterina Zhurakovskaya, Lauri J Lehto, Heikki Tanila, Michael Garwood, Shalom Michaeli and 3 more

Abstract read
In one paragraph

Article in NeuroImage, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Where do we stand on fMRI in awake mice?Cerebral cortex (New York, N.Y. : 1991) · 2024
    Pooled it
  2. A Sub-Microsecond Switch Enabling SWIFTMagnetic resonance in medicine · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Mapping cardiac and respiratory pulsations simultaneously with functional connectivity in the rat brain using zero echo time fMRI.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2026
    Article
  7. Review
  8. Article
  9. Review
  10. Biphasic acclimation for simultaneous wide-field fluorescent CaImaging neuroscience (Cambridge, Mass.) · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Correlation of zero echo time functional MRI with neuronal activity in rats.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2025
    Article
  16. Neuromodulation in Small Animal fMRI.Journal of magnetic resonance imaging : JMRI · 2025
    Review
  17. Simultaneous zero echo time fMRI of rat brain and spinal cord.bioRxiv : the preprint server for biology · 2025
    Article
  18. Review
  19. Review
  20. Multi-coil TMS for preclinical applications in ultra-high-field MRI.Imaging neuroscience (Cambridge, Mass.) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Jaakko PaasonenA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Hanne LaaksoA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland; Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, USA.
Tiina PirttimäkiA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland; Department of Psychology, University of Jyväskyla, Jyväskyla, Finland.
Petteri StenroosA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Raimo A SaloA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Ekaterina ZhurakovskayaA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland; Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, USA.
Lauri J LehtoA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland; Center for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, USA.
Heikki TanilaA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland.
Michael GarwoodCenter for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, USA.
Shalom MichaeliCenter for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, USA.
Djaudat IdiyatullinCenter for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, USA.
Silvia MangiaCenter for Magnetic Resonance Research, University of Minnesota, Minneapolis, MN, USA.
Olli GröhnA. I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland. Electronic address: olli.grohn@uef.fi.

Funding

TRD4 - Ultrahigh Field Engineering and SafetyP41EB027061 · NIBIB · UNIVERSITY OF MINNESOTA · PI Gregory John Metzger, KAMIL UGURBIL · 2019 to 2026
$11.7M
NMR Imaging and SpectroscopyP41EB015894 · NIBIB · UNIVERSITY OF MINNESOTA · PI UGURBIL, KAMIL · 2012 to 2017
$8.4M
High density multielectrode arrays with spatially selective unidirectional and rotating fields for investigation of neuronal networksU01NS103569 · NINDS · UNIVERSITY OF MINNESOTA · PI MICHAELI, SHALOM · 2017 to 2019
$3.7M
NIBIB NIH HHS P41 EB015894NIBIB NIH HHS P41 EB027061NINDS NIH HHS U01 NS103569
6 · The paper itself

Abstract

Functional magnetic resonance imaging (fMRI) studies in animal models provide invaluable information regarding normal and abnormal brain function, especially when combined with complementary stimulation and recording techniques. The echo planar imaging (EPI) pulse sequence is the most common choice for fMRI investigations, but it has several shortcomings. EPI is one of the loudest sequences and very prone to movement and susceptibility-induced artefacts, making it suboptimal for awake imaging. Additionally, the fast gradient-switching of EPI induces disrupting currents in simultaneous electrophysiological recordings. Therefore, we investigated whether the unique features of Multi-Band SWeep Imaging with Fourier Transformation (MB-SWIFT) overcome these issues at a high 9.4 T magnetic field, making it a potential alternative to EPI. MB-SWIFT had 32-dB and 20-dB lower peak and average sound pressure levels, respectively, than EPI with typical fMRI parameters. Body movements had little to no effect on MB-SWIFT images or functional connectivity analyses, whereas they severely affected EPI data. The minimal gradient steps of MB-SWIFT induced significantly lower currents in simultaneous electrophysiological recordings than EPI, and there were no electrode-induced distortions in MB-SWIFT images. An independent component analysis of the awake rat functional connectivity data obtained with MB-SWIFT resulted in near whole-brain level functional parcellation, and simultaneous electrophysiological and fMRI measurements in isoflurane-anesthetized rats indicated that MB-SWIFT signal is tightly linked to neuronal resting-state activity. Therefore, we conclude that the MB-SWIFT sequence is a robust preclinical brain mapping tool that can overcome many of the drawbacks of conventional EPI fMRI at high magnetic fields.

Indexed as

ArtifactsMovementNoiseWakefulnessAnesthetics, InhalationAnimalsEcho-Planar ImagingElectroencephalographyFourier AnalysisFunctional NeuroimagingIsofluraneMagnetic Resonance ImagingMaleRatsRats, WistarUnconsciousnessAnesthetics, InhalationIsofluraneAwakeElectroencephalographyFunctional connectivityFunctional magnetic resonance imagingRats

Identifiers

PMID31730923
PMCPMC7008094

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.