Evidence map›Paper›PMID 31730149›Full record

ArticleChemical communications (Cambridge, England)2019

PMP-diketopiperazine adducts form at the active site of a PLP dependent enzyme involved in formycin biosynthesis.

Sisi Gao, Huanting Liu, Valérie de Crécy-Lagard, Wen Zhu, Nigel G J Richards, James H Naismith

Open access · hybridAbstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
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  8. Whole-Genome Sequence ofMicrobiology resource announcements · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 6 institutions in 3 countries.

Sisi GaoResearch Complex at Harwell, Didcot, OX11 0FA, UK.
Huanting Liu
Valérie de Crécy-Lagard
Wen Zhu
Nigel G J Richards
James H Naismith
Foundation for Applied Molecular Evolution · USQB3 · USSichuan University · CNSt. Andrews University · USUniversity of Florida · USUniversity of St Andrews · GB

Funding

Pyridoxal 5'-phosphate homeostasis in Escherichia coliR01GM129793 · NIGMS · UNIVERSITY OF FLORIDA · PI DE CRECY-LAGARD, VALERIE A · 2019 to 2022
$1.2M
NIGMS NIH HHS R01 GM129793
6 · The paper itself

Abstract

ForI is a PLP-dependent enzyme from the biosynthetic pathway of the C-nucleoside antibiotic formycin. Cycloserine is thought to inhibit PLP-dependent enzymes by irreversibly forming a PMP-isoxazole. We now report that ForI forms novel PMP-diketopiperazine derivatives following incubation with both d and l cycloserine. This unexpected result suggests chemical diversity in the chemistry of cycloserine inhibition.

Indexed as

Bacterial ProteinsBiocatalysisCatalytic DomainCycloserineDiketopiperazinesFormycinsHydrogen-Ion ConcentrationPyridoxal PhosphatePyridoxamineStreptomycesTransaminasesBacterial ProteinsCycloserineDiketopiperazinesformycinFormycinsPyridoxal PhosphatePyridoxaminepyridoxamine phosphateTransaminases

Identifiers

PMID31730149
PMCPMC6927412
OpenAlexW2987080839

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.