Evidence map›Paper›PMID 31729379›Full record

ArticleNature communications2019

Prolyl hydroxylase substrate adenylosuccinate lyase is an oncogenic driver in triple negative breast cancer.

Giada Zurlo, Xijuan Liu, Mamoru Takada, Cheng Fan, Jeremy M Simon, Travis S Ptacek, Javier Rodriguez, Alex von Kriegsheim, Juan Liu, Jason W Locasale and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 4 countries.

Giada ZurloLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.
Xijuan LiuLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.
Mamoru TakadaLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.
Cheng FanLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.
Jeremy M SimonLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.ORCID http://orcid.org/0000-0003-3906-1663
Travis S PtacekLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.
Javier RodriguezCancer Research UK Edinburgh Centre, IGMM, University of Edinburgh, Edinburgh, EH4 2XR, UK.
Alex von KriegsheimCancer Research UK Edinburgh Centre, IGMM, University of Edinburgh, Edinburgh, EH4 2XR, UK.
Juan LiuDepartment of Pharmacology and Cancer Biology, Duke University School of Medicine, Durham, NC, 27710, USA.
Jason W LocasaleDepartment of Pharmacology and Cancer Biology, Duke University School of Medicine, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0002-7766-3502
Adam RobinsonLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.
Jing ZhangLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.ORCID http://orcid.org/0000-0001-6438-9113
Jessica M HollerDepartment of Pediatrics, School of Medicine, Emory University, Atlanta, GA, 30322, USA.
Baek KimDepartment of Pediatrics, School of Medicine, Emory University, Atlanta, GA, 30322, USA.ORCID http://orcid.org/0000-0001-7986-4335
Marie ZikánováResearch Unit for Rare Diseases, Department of Pediatrics and Adolescent Medicine, First Faculty of Medicine, Charles University and General University Hospital in Prague, Prague, Czechia.
Jörgen BierauDepartment of Clinical Genetics, Maastricht University Medical Centre, Maastricht, The Netherlands.
Ling XieDepartment of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, NC, 27599, USA.
Xian ChenDepartment of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, NC, 27599, USA.
Mingjie LiLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.
Charles M PerouLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA.ORCID http://orcid.org/0000-0001-9827-2247
Qing ZhangLineberger Comprehensive Cancer Center, University of North Carolina School of Medicine, Chapel Hill, NC, 27599, USA. Qing.Zhang@utsouthwestern.edu.ORCID http://orcid.org/0000-0002-6595-8995
University of North Carolina at Chapel Hill · USEdinburgh Cancer Research · GBEmory University · USCharles University · CZDuke University · USMaastricht University Medical Centre · NL

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
UNC Neuroscience Center Research Cores: MicroscopyP30NS045892 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ZYLKA, MARK J. · 2003 to 2022
$11.5M
Preclinical CoreU54HD079124 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI PIVEN, JOSEPH · 2013 to 2019
$8.0M
Lentivirus Replication Strategy and PathogenesisR01AI136581 · NIAID · EMORY UNIVERSITY · PI Baek Kim · 2018 to 2026
$3.9M
Exploration of ZHX2 as a novel substrate of pVHL and an oncogenic driver of renal cancerR01CA211732 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI ZHANG, QING · 2017 to 2021
$2.1M
Role of the EglN2 Target FOXO3a in Breast CancerR00CA160351 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ZHANG, QING · 2013 to 2015
$725k
OTUB1 as a Novel Therapeutic Target in Kidney Cancer by Deubiquitinating HIF2alphaR21CA223675 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BALDWIN, ALBERT SIDNEY · 2018 to 2019
$366k
NCI NIH HHS R00 CA160351NCI NIH HHS R01 CA211732NCI NIH HHS R21 CA223675NIAID NIH HHS R01 AI136581NICHD NIH HHS U54 HD079124NIEHS NIH HHS P30 ES010126NINDS NIH HHS P30 NS045892Wellcome Trust
6 · The paper itself

Abstract

Protein hydroxylation affects protein stability, activity, and interactome, therefore contributing to various diseases including cancers. However, the transiency of the hydroxylation reaction hinders the identification of hydroxylase substrates. By developing an enzyme-substrate trapping strategy coupled with TAP-TAG or orthogonal GST- purification followed by mass spectrometry, we identify adenylosuccinate lyase (ADSL) as an EglN2 hydroxylase substrate in triple negative breast cancer (TNBC). ADSL expression is higher in TNBC than other breast cancer subtypes or normal breast tissues. ADSL knockout impairs TNBC cell proliferation and invasiveness in vitro and in vivo. An integrated transcriptomics and metabolomics analysis reveals that ADSL activates the oncogenic cMYC pathway by regulating cMYC protein level via a mechanism requiring ADSL proline 24 hydroxylation. Hydroxylation-proficient ADSL, by affecting adenosine levels, represses the expression of the long non-coding RNA MIR22HG, thus upregulating cMYC protein level. Our findings highlight the role of ADSL hydroxylation in controlling cMYC and TNBC tumorigenesis.

Indexed as

AdenosineAdenylosuccinate LyaseCarcinogenesisCell Line, TumorCell ProliferationFemaleHumansHypoxia-Inducible Factor-Proline DioxygenasesMicroRNAsProto-Oncogene Proteins c-mycTriple Negative Breast NeoplasmsAdenosineAdenylosuccinate LyaseEGLN2 protein, humanHypoxia-Inducible Factor-Proline DioxygenasesMicroRNAsMIRN22 microRNA, humanMYC protein, humanProto-Oncogene Proteins c-myc

Identifiers

PMID31729379
PMCPMC6858455
OpenAlexW2987204574

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.