ArticlePlant methods2019
A low-cost aeroponic phenotyping system for storage root development: unravelling the below-ground secrets of cassava (
Article in Plant methods, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- RPT: An integrated root phenotyping toolbox for segmenting and quantifying root system architecture.Plant biotechnology journal · 2025Article
- Aeroponic approach for nondestructive root exudate collection and simulation of variable water stress trialed on cotton (Gossypium hirsutum).Scientific reports · 2024Article
- Progressive drought alters the root exudate metabolome and differentially activates metabolic pathways in cotton (Frontiers in plant science · 2023Article
- Application of Improved UNet and EnglightenGAN for Segmentation and Reconstruction of In Situ Roots.Plant phenomics (Washington, D.C.) · 2023Article
- Recent advances in methods forPeerJ · 2022Review
- Fifty years of a public cassava breeding program: evolution of breeding objectives, methods, and decision-making processes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Review
- Comprehensive Genome-Wide Association Analysis Reveals the Genetic Basis of Root System Architecture in Soybean.Frontiers in plant science · 2020Article
- Machine learning for high-throughput field phenotyping and image processing provides insight into the association of above and below-ground traits in cassava (Plant methods · 2020Article
- Convolutional Neural Net-Based Cassava Storage Root Counting Using Real and Synthetic Images.Frontiers in plant science · 2019Article
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5 authors.
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Abstract
backgroundRoot and tuber crops are becoming more important for their high source of carbohydrates, next to cereals. Despite their commercial impact, there are significant knowledge gaps about the environmental and inherent regulation of storage root (SR) differentiation, due in part to the innate problems of studying storage roots and the lack of a suitable model system for monitoring storage root growth. The research presented here aimed to develop a reliable, low-cost effective system that enables the study of the factors influencing cassava storage root initiation and development.
resultsWe explored simple, low-cost systems for the study of storage root biology. An aeroponics system described here is ideal for real-time monitoring of storage root development (SRD), and this was further validated using hormone studies. Our aeroponics-based auxin studies revealed that storage root initiation and development are adaptive responses, which are significantly enhanced by the exogenous auxin supply. Field and histological experiments were also conducted to confirm the auxin effect found in the aeroponics system. We also developed a simple digital imaging platform to quantify storage root growth and development traits. Correlation analysis confirmed that image-based estimation can be a surrogate for manual root phenotyping for several key traits.
conclusionsThe aeroponic system developed from this study is an effective tool for examining the root architecture of cassava during early SRD. The aeroponic system also provided novel insights into storage root formation by activating the auxin-dependent proliferation of secondary xylem parenchyma cells to induce the initial root thickening and bulking. The developed system can be of direct benefit to molecular biologists, breeders, and physiologists, allowing them to screen germplasm for root traits that correlate with improved economic traits.
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