Evidence map›Paper›PMID 31727950›Full record

ArticleScientific reports2019

Additive manufacturing of laminar flow cells for single-molecule experiments.

Arash Ahmadi, Katharina Till, Yngve Hafting, Mark Schüttpelz, Magnar Bjørås, Kyrre Glette, Jim Tørresen, Alexander D Rowe, Bjørn Dalhus

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Arash AhmadiDepartment of Medical Biochemistry, Institute for Clinical Medicine, University of Oslo, Oslo, Norway.ORCID http://orcid.org/0000-0001-5566-7775
Katharina TillBiomolecular Photonics, Department of Physics, University of Bielefeld, Bielefeld, Germany.
Yngve HaftingDepartment of Informatics, University of Oslo, Oslo, Norway.
Mark SchüttpelzBiomolecular Photonics, Department of Physics, University of Bielefeld, Bielefeld, Germany.ORCID http://orcid.org/0000-0001-5338-1706
Magnar BjøråsDepartment of Clinical and Molecular Medicine, Faculty of Medicine and Health Sciences, Norwegian University of Science and Technology (NTNU), Trondheim, Norway.
Kyrre GletteDepartment of Informatics, University of Oslo, Oslo, Norway.ORCID http://orcid.org/0000-0003-3550-3225
Jim TørresenDepartment of Informatics, University of Oslo, Oslo, Norway.
Alexander D RoweDepartment of Medical Biochemistry, Institute for Clinical Medicine, University of Oslo, Oslo, Norway. alerow@ous-hf.no.
Bjørn DalhusDepartment of Medical Biochemistry, Institute for Clinical Medicine, University of Oslo, Oslo, Norway. bjorn.dalhus@medisin.uio.no.ORCID http://orcid.org/0000-0002-9867-8391

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A microfluidic laminar flow cell (LFC) forms an indispensable component in single-molecule experiments, enabling different substances to be delivered directly to the point under observation and thereby tightly controlling the biochemical environment immediately surrounding single molecules. Despite substantial progress in the production of such components, the process remains relatively inefficient, inaccurate and time-consuming. Here we address challenges and limitations in the routines, materials and the designs that have been commonly employed in the field, and introduce a new generation of LFCs designed for single-molecule experiments and assembled using additive manufacturing. We present single- and multi-channel, as well as reservoir-based LFCs produced by 3D printing to perform single-molecule experiments. Using these flow cells along with optical tweezers, we show compatibility with single-molecule experiments including the isolation and manipulation of single DNA molecules either attached to the surface of a coverslip or as freely movable DNA dumbbells, as well as direct observation of protein-DNA interactions. Using additive manufacturing to produce LFCs with versatility of design and ease of production allow experimentalists to optimize the flow cells to their biological experiments and provide considerable potential for performing multi-component single-molecule experiments.

Indexed as

DNAEquipment DesignMicrofluidicsOptical TweezersPrinting, Three-DimensionalSingle Molecule ImagingDNA

Identifiers

PMID31727950
PMCPMC6856346

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.