Evidence map›Paper›PMID 31727942›Full record

ArticleScientific reports2019

The positive correlation of TIPRL with LC3 and CD133 contributes to cancer aggressiveness: potential biomarkers for early liver cancer.

Soo Young Jun, Su-Jin Jeon, Ji-Yong Yoon, Jeong-Ju Lee, Hyang Ran Yoon, Min-Hyuk Choi, Debasish Halder, Kwangho Lee, Nam-Soon Kim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Soo Young JunMedical Genomics Research Center, Korea Research Institute of Bioscience & Biotechnology, Daejeon, 34141, Republic of Korea.
Su-Jin JeonMedical Genomics Research Center, Korea Research Institute of Bioscience & Biotechnology, Daejeon, 34141, Republic of Korea.
Ji-Yong YoonMedical Genomics Research Center, Korea Research Institute of Bioscience & Biotechnology, Daejeon, 34141, Republic of Korea.
Jeong-Ju LeeMedical Genomics Research Center, Korea Research Institute of Bioscience & Biotechnology, Daejeon, 34141, Republic of Korea.
Hyang Ran YoonImmunotherapy Convergence Research Center, Korea Research Institute of Bioscience & Biotechnology, Daejeon, 34141, Republic of Korea.
Min-Hyuk ChoiMedical Genomics Research Center, Korea Research Institute of Bioscience & Biotechnology, Daejeon, 34141, Republic of Korea.
Debasish HalderMedical Genomics Research Center, Korea Research Institute of Bioscience & Biotechnology, Daejeon, 34141, Republic of Korea.
Kwangho LeeBio and Drug Discovery Division, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Nam-Soon KimMedical Genomics Research Center, Korea Research Institute of Bioscience & Biotechnology, Daejeon, 34141, Republic of Korea. nskim37@kribb.re.kr.
Korea Research Institute of Bioscience and Biotechnology · KRKorea Research Institute of Chemical Technology · KRKorea University of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Studies have reported dysregulation of TIPRL, LC3 and CD133 in liver cancer tissues. However, their respective relationships to liver cancer and roles as biomarkers for prognosis and diagnosis of liver cancer have never been studied. Here we report that the level of TIPRL is significantly correlated with levels of LC3 (Spearman r = 0.9) and CD133 (r = 0.7) in liver cancer tissues. We observed significant upregulations of TIPRL, LC3 and CD133 in hepatocellular carcinomas (HCCs) compared with adjacent normal tissues. Importantly, TIPRL, tested among additional variables, showed a significant impact on the prognosis of HCC patients. TIPRL knockdown significantly reduced expressions of LC3, CD133, stemness-related genes, as well as viability and stemness of liver cancer cell-lines, which were promoted by ectopic TIPRL expression. Either alone or as a combination, TIPRL, LC3 and CD133 showed significant values of area under the curve (AUC) and sensitivity/specificity in early liver cancer tissues. Furthermore, the statistical association and the diagnostic efficacies of TIPRL, LC3 and CD133 in HCC tissues were confirmed in a different IHC cohort. This data demonstrates that the complex involvement of TIPRL/LC3/CD133 in liver cancer aggressiveness can together or individually serve as potential biomarkers for the early detection of liver cancer.

Indexed as

Up-RegulationAC133 AntigenArea Under CurveBiomarkers, TumorCarcinoma, HepatocellularCohort StudiesEarly Detection of CancerFemaleGene Expression Regulation, NeoplasticHumansIntracellular Signaling Peptides and ProteinsLiver NeoplasmsMaleMicrotubule-Associated ProteinsNeoplastic Stem CellsPrognosisAC133 AntigenBiomarkers, TumorIntracellular Signaling Peptides and ProteinsMAP1LC3A protein, humanMicrotubule-Associated ProteinsPROM1 protein, humanTIPRL protein, human

Identifiers

PMID31727942
PMCPMC6856114
OpenAlexW2986989757

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.