Evidence map›Paper›PMID 31727180›Full record

ArticleVeterinary research2019

Genotypic diversity of Streptococcus suis and the S. suis-like bacterium Streptococcus ruminantium in ruminants.

Masatoshi Okura, Fumito Maruyama, Atsushi Ota, Takeshi Tanaka, Yohei Matoba, Aya Osawa, Sayed Mushtaq Sadaat, Makoto Osaki, Atsushi Toyoda, Yoshitoshi Ogura and 2 more

Open access · goldAbstract read
In one paragraph

Article in Veterinary research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 61 citations in OpenAlex.

  1. Emerging microbes & infections · 2026
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  2. Microorganisms · 2025
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  4. Comparative Genome Analysis of TwoAnimals : an open access journal from MDPI · 2024
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  10. Canada: Isolation ofThe Canadian veterinary journal = La revue veterinaire canadienne · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 9 institutions in 3 countries.

Masatoshi OkuraDivision of Bacterial and Parasitic Diseases, National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Japan. mokura@affrc.go.jp.ORCID http://orcid.org/0000-0002-5734-730X
Fumito MaruyamaDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Atsushi OtaDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Takeshi TanakaNairiku Meat Inspection Center, Yamagata Prefectural Government, Yamagata, Japan.
Yohei MatobaMurayama Public Health Center, Yamagata Prefectural Government, Yamagata, Japan.
Aya OsawaMatsumoto Livestock Hygiene Service Center, Nagano Prefectural Government, Matsumoto, Japan.
Sayed Mushtaq SadaatMinistry of Agriculture, Irrigation and Livestock, Animal Health Directorate, Central Veterinary Diagnostic and Research Laboratory, Kabul, Afghanistan.
Makoto OsakiDivision of Bacterial and Parasitic Diseases, National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Japan.
Atsushi ToyodaDepartment of Genomics and Evolutionary Biology, National Institute of Genetics, Shizuoka, Japan.
Yoshitoshi OguraDepartment of Bacteriology, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan.
Tetsuya HayashiDepartment of Bacteriology, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan.
Daisuke TakamatsuDivision of Bacterial and Parasitic Diseases, National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Japan.
National Agriculture and Food Research Organization · JPKyushu University · JPKyoto University · JPMatsumoto Livestock Hygiene Service Center · JPMinistry of Public Health · AFNational Institute of Genetics · JPUniversidad de La Frontera · CLYamagata Prefectural Institute of Public Health · JPYamagata Prefectural Police · JP

Funding

Japan Society for the Promotion of Science 16H01782Japan Society for the Promotion of Science 16H05501Japan Society for the Promotion of Science 16H06279Japan Society for the Promotion of Science 18H02658Japan Society for the Promotion of Science 221S0002Japan Society for the Promotion of Science 26870840
6 · The paper itself

Abstract

Although Streptococcus suis has attracted public attention as a major swine and human pathogen, this bacterium has also been isolated from other animals, including ruminants. However, recent taxonomic studies revealed the existence of other species that were previously identified as S. suis, and some of these isolates were reclassified as the novel species Streptococcus ruminantium. In Japan, biochemically identified S. suis is frequently isolated from diseased ruminants; however, such isolates have not yet been identified accurately, and their aetiological importance in ruminants is unclear. Therefore, to understand the importance of S. suis and S. suis-like bacteria in ruminants, we reclassified S. suis isolates from ruminants according to the updated classification and investigated their genetic diversity. Although both S. suis and S. ruminantium were isolated from healthy and diseased ruminants, most of the isolates from diseased animals were S. ruminantium, implying that S. ruminantium is more likely to be associated with ruminant disease than S. suis. However, the ruminant S. suis and S. ruminantium isolates from diseased animals were classified into diverse genotypes rather than belonging to certain clonal groups. Genome sequence analysis of 20 S. ruminantium isolates provided information about the antibiotic resistance, potential virulence, and serological diversity of this species. We further developed an S. ruminantium-specific PCR assay to aid in the identification of this bacterium. The information obtained and the method established in this study will contribute to the accurate diagnosis of ruminant streptococcal infections.

Indexed as

Genetic VariationGenotypeAnimalsCattleCattle DiseasesGoat DiseasesGoatsJapanPrevalenceSheepSheep DiseasesStreptococcal InfectionsStreptococcusStreptococcus suis

Identifiers

PMID31727180
PMCPMC6854688
OpenAlexW2988796463

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.