Evidence map›Paper›PMID 31727065›Full record

ArticleMicrobial cell factories2019

Engineering cytoplasmic acetyl-CoA synthesis decouples lipid production from nitrogen starvation in the oleaginous yeast Rhodosporidium azoricum.

Silvia Donzella, Daniela Cucchetti, Claudia Capusoni, Aurora Rizzi, Silvia Galafassi, Gambaro Chiara, Concetta Compagno

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. Heterologous Expression ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  4. Review
  5. Article
  6. Bioprocesses with Reduced Ecological Footprint by MarineJournal of fungi (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Silvia DonzellaDepartment of Food, Environmental and Nutritional Sciences, University of Milan, Milan, Italy.
Daniela CucchettiVersalis SPA, Green Chemistry CRNO, Novara, Italy.
Claudia CapusoniDepartment of Food, Environmental and Nutritional Sciences, University of Milan, Milan, Italy.
Aurora RizziDepartment of Food, Environmental and Nutritional Sciences, University of Milan, Milan, Italy.
Silvia GalafassiWater Research Institute, National Research Council, Verbania, Italy.
Gambaro ChiaraEni S.p.A.-Renewable Energy and Environmental R&D Center-Istituto Eni Donegani, Novara, Italy.
Concetta CompagnoDepartment of Food, Environmental and Nutritional Sciences, University of Milan, Milan, Italy. concetta.compagno@unimi.it.ORCID http://orcid.org/0000-0003-0760-2533
University of Milan · ITEni (Italy) · ITWater Research Institute · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOleaginous yeasts are able to accumulate very high levels of neutral lipids especially under condition of excess of carbon and nitrogen limitation (medium with high C/N ratio). This makes necessary the use of two-steps processes in order to achieve high level of biomass and lipid. To simplify the process, the decoupling of lipid synthesis from nitrogen starvation, by establishing a cytosolic acetyl-CoA formation pathway alternative to the one catalysed by ATP-citrate lyase, can be useful.

resultsIn this work, we introduced a new cytoplasmic route for acetyl-CoA (AcCoA) formation in Rhodosporidium azoricum by overexpressing genes encoding for homologous phosphoketolase (Xfpk) and heterologous phosphotransacetylase (Pta). The engineered strain PTAPK4 exhibits higher lipid content and produces higher lipid concentration than the wild type strain when it was cultivated in media containing different C/N ratios. In a bioreactor process performed on glucose/xylose mixture, to simulate an industrial process for lipid production from lignocellulosic materials, we obtained an increase of 89% in final lipid concentration by the engineered strain in comparison to the wild type. This indicates that the transformed strain can produce higher cellular biomass with a high lipid content than the wild type. The transformed strain furthermore evidenced the advantage over the wild type in performing this process, being the lipid yields 0.13 and 0.05, respectively.

conclusionOur results show that the overexpression of homologous Xfpk and heterologous Pta activities in R. azoricum creates a new cytosolic AcCoA supply that decouples lipid production from nitrogen starvation. This metabolic modification allows improving lipid production in cultural conditions that can be suitable for the development of industrial bioprocesses using lignocellulosic hydrolysates.

Indexed as

Acetyl Coenzyme AAldehyde-LyasesBacillus subtilisBasidiomycotaBiomassCytoplasmFungal ProteinsGenes, BacterialGenes, FungalGenetic EngineeringHomologous RecombinationLigninLipid MetabolismLipidsMetabolic EngineeringNitrogenAcetyl Coenzyme AAldehyde-LyasesFungal ProteinsLigninlignocelluloseLipidsNitrogenPhosphate AcetyltransferasephosphoketolaseRecombinant ProteinsLignocellulosic hydrolysatesLipid productionOleaginous yeastsPhosphoketolasesPhosphotransacetylaseRenewable resourcesRhodosporidium azoricum

Identifiers

PMID31727065
PMCPMC6854766
OpenAlexW2983535820

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.