Evidence map›Paper›PMID 31725875›Full record

ArticleInflammatory bowel diseases2020

Microbial Shifts and Shorter Time to Bowel Resection Surgery Associated with C. difficile in Pediatric Crohn's Disease.

Jennifer Hellmann, Heidi Andersen, Lin Fei, Aaron Linn, Ramona Bezold, Kathleen Lake, Kimberly Jackson, Danielle Meyer, Kelsie Dirksing, Erin Bonkowski and 3 more

Open access · greenAbstract read
In one paragraph

Article in Inflammatory bowel diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Frontiers in pediatrics · 2025
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Gut microbiome and mycobiome in inflammatory bowel disease patients withFrontiers in cellular and infection microbiology · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Jennifer HellmannDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Heidi AndersenDivision of Infectious Disease, Cincinnati, OH, USA.
Lin FeiDivision of Biostatistics and Epidemiology, Department of Pediatrics, Cincinnati Children's Hospital Medical Center and the University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Aaron LinnDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Ramona BezoldDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Kathleen LakeDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Kimberly JacksonDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Danielle MeyerDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Kelsie DirksingDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Erin BonkowskiDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Nicholas J OllberdingDivision of Biostatistics and Epidemiology, Department of Pediatrics, Cincinnati Children's Hospital Medical Center and the University of Cincinnati College of Medicine, Cincinnati, OH, USA.
David B HaslamDivision of Infectious Disease, Cincinnati, OH, USA.
Lee DensonDivision of Gastroenterology, Hepatology, and Nutrition, Cincinnati, OH, USA.
Cincinnati Children's Hospital Medical Center · US

Funding

Stem Cell/Organoid and Genome Editing CoreP30DK078392 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Alexander Miethke · 2007 to 2026
$24.4M
PEDIATRIC GASTROENTEROLOGY AND NUTRITION TRAINING GRANTT32DK007727 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Phillip P Minar · 1995 to 2026
$11.3M
Molecular Epidemiology in Children's Environmental Health Training Program (MECEH)T32ES010957 · NIEHS · UNIVERSITY OF CINCINNATI · PI Kelly J Brunst · 2001 to 2026
$11.1M
Dosing and Pilot Efficacy of 2'-Fucosyllactose in Inflammatory Bowel DiseaseR01HD094862 · NICHD · CINCINNATI CHILDRENS HOSP MED CTR · PI LEE ARMISTEAD DENSON, Jeffrey Samuel Hyams · 2018 to 2026
$5.0M
Causes and consequences of neutrophil dysfunction in early onset Crohn's diseaseR01DK098231 · NIDDK · EMORY UNIVERSITY · PI DENSON, LEE ARMISTEAD, KUGATHASAN, SUBRA · 2013 to 2017
$3.3M
NICHD NIH HHS R01 HD094862NIDDK NIH HHS P30 DK078392NIDDK NIH HHS R01 DK098231NIDDK NIH HHS T32 DK007727NIEHS NIH HHS T32 ES010957
6 · The paper itself

Abstract

backgroundClostridioides difficile infection and colonization are common in pediatric Crohn's disease (CD). Our aims were to test the relationship between C. difficile positivity and bowel resection surgery and to characterize microbial shifts associated with C. difficile carriage and surgery.

methodsA retrospective single-center study of 75 pediatric CD patients tested for association between C. difficile carriage and bowel resection surgery. A prospective single-center study of 70 CD patients utilized C. difficile testing and shotgun metagenomic sequencing of fecal samples to define microbiota variation stratified by C. difficile carriage or history of surgery.

resultsThe rate of bowel resection surgery increased from 21% in those without C. difficile to 67% in those with (P = 0.003). From a Kaplan-Meier survival model, the hazard ratio for time to first surgery was 4.4 (95% CI, 1.2-16.2; P = 0.00) in patients with positive C. difficile testing in the first year after diagnosis. Multivariable logistic regression analysis confirmed this association (odds ratio 16.2; 95% CI, 2.2-120; P = 0.006). Larger differences in microbial abundance and metabolic pathways were observed in patients with prior surgery than in those with C. difficile carriage. Depletion of Alistipes and Ruminococcus species and reduction in methionine biosynthesis were noted in patients with both C. difficile carriage and past surgery.

conclusionsA positive C. difficile test during the first year after diagnosis is associated with decreased time to first bowel resection surgery in pediatric Crohn's disease. Depletion of beneficial commensals and methionine biosynthesis in patients with C. difficile carriage may contribute to increased risk for surgery.

Indexed as

Clostridioides difficileAdolescentChildColectomyCrohn DiseaseEnterocolitis, PseudomembranousFecesFemaleHumansKaplan-Meier EstimateMaleMetagenomeMethionineProportional Hazards ModelsProspective StudiesRetrospective StudiesMethioninebowel resection surgeryC. difficile infectionfecal microbiomepediatric inflammatory bowel diseaseshotgun metagenomic sequencing

Identifiers

PMID31725875
PMCPMC7365806
OpenAlexW2983224212

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.