Evidence map›Paper›PMID 31723061›Full record

ArticleJCI insight2019

Genome-wide suppressor screen identifies USP35/USP38 as therapeutic candidates for ciliopathies.

I-Chun Tsai, Kevin A Adams, Joyce A Tzeng, Omar Shennib, Perciliz L Tan, Nicholas Katsanis

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Pathophysiology of Primary Cilia: Signaling and Proteostasis Regulation.Frontiers in cell and developmental biology · 2022
    Review
  7. Article
  8. Article
  9. Renal Ciliopathies: Sorting Out Therapeutic Approaches for Nephronophthisis.Frontiers in cell and developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

I-Chun TsaiCenter for Human Disease Modeling, Duke University School of Medicine, Durham, North Carolina, USA.
Kevin A AdamsCenter for Human Disease Modeling, Duke University School of Medicine, Durham, North Carolina, USA.
Joyce A TzengCenter for Human Disease Modeling, Duke University School of Medicine, Durham, North Carolina, USA.
Omar ShennibCenter for Human Disease Modeling, Duke University School of Medicine, Durham, North Carolina, USA.
Perciliz L TanCenter for Human Disease Modeling, Duke University School of Medicine, Durham, North Carolina, USA.
Nicholas KatsanisCenter for Human Disease Modeling, Duke University School of Medicine, Durham, North Carolina, USA.
Duke University · USNorthwestern University · US

Funding

Project 3P50MH094268 · NIMH · JOHNS HOPKINS UNIVERSITY · PI SAWA, AKIRA · 2011 to 2020
$19.9M
Molecular Genetics of BBSR01HD042601 · NICHD · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2003 to 2023
$8.2M
Genetic and Functional Studies of Human Ciliary SyndromesR01DK072301 · NIDDK · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2005 to 2022
$7.2M
Research Project 3P50DK096415 · NIDDK · DUKE UNIVERSITY · PI HAUSER, MICHAEL A · 2012 to 2016
$4.2M
The Role of Basal Bodies in Wnt SignalingR01GM121317 · NIGMS · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2016 to 2019
$1.7M
Genetic and Functional Interaction between the proteasome and the Primary CiliumF32DK094578 · NIDDK · DUKE UNIVERSITY · PI TSAI, I-CHUN · 2012 to 2014
$180k
NICHD NIH HHS R01 HD042601NIDDK NIH HHS F32 DK094578NIDDK NIH HHS P50 DK096415NIDDK NIH HHS R01 DK072301NIGMS NIH HHS R01 GM121317NIMH NIH HHS P50 MH094268
6 · The paper itself

Abstract

The ciliopathies are a group of phenotypically overlapping disorders caused by structural or functional defects in the primary cilium. Although disruption of numerous signaling pathways and cellular trafficking events have been implicated in ciliary pathology, treatment options for affected individuals remain limited. Here, we performed a genome-wide RNAi (RNA interference) screen to identify genetic suppressors of BBS4, one of the genes mutated in Bardet-Biedl syndrome (BBS). We discovered 10 genes that, when silenced, ameliorate BBS4-dependent pathology. One of these encodes USP35, a negative regulator of the ubiquitin proteasome system, suggesting that inhibition of a deubiquitinase, and subsequent facilitation of the clearance of signaling components, might ameliorate BBS-relevant phenotypes. Testing of this hypothesis in transient and stable zebrafish genetic models showed this posit to be true; suppression or ablation of usp35 ameliorated hallmark ciliopathy defects including impaired convergent extension (CE), renal tubule convolution, and retinal degeneration with concomitant clearance of effectors such as β-catenin and rhodopsin. Together, our findings reinforce a direct link between proteasome-dependent degradation and ciliopathies and suggest that augmentation of this system might offer a rational path to novel therapeutic modalities.

Indexed as

AnimalsBardet-Biedl SyndromeCell LineCiliaCiliopathiesCRISPR-Cas SystemsEndopeptidasesGenetic TechniquesHumansMicrotubule-Associated ProteinsPhenotypeRetinal DegenerationUbiquitin-Specific ProteasesWnt Signaling PathwayZebrafishZebrafish ProteinsBBS4 protein, humanEndopeptidasesMicrotubule-Associated ProteinsUbiquitin-Specific ProteasesUSP35 protein, humanUSP38 protein, humanZebrafish ProteinsGenetic diseasesGeneticsTherapeuticsUbiquitin-proteosome system

Identifiers

PMID31723061
PMCPMC6948861
OpenAlexW2986691843

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.