Evidence map›Paper›PMID 31722778›Full record

ArticleBMB reports2019

LIR motifs and the membrane-targeting domain are complementary in the function of RavZ.

Sang-Won Park, Yong-Woo Jun, Pureum Jeon, You-Kyung Lee, Ju-Hui Park, Seung-Hwan Lee, Jin-A Lee, Deok-Jin Jang

Open access · goldAbstract read
In one paragraph

Article in BMB reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Mechanisms and roles of membrane-anchored ATG8s.Frontiers in cell and developmental biology · 2025
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Interfering with Autophagy: The Opposing Strategies Deployed byFrontiers in cellular and infection microbiology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sang-Won ParkDepartment of Ecological Science, College of Ecology and Environment, Kyungpook National University, Sangju 37224, Korea.
Yong-Woo JunDepartment of Ecological Science, College of Ecology and Environment, Kyungpook National University, Sangju 37224, Korea.
Pureum JeonDepartment of Biological Sciences and Biotechnology, College of Life Sciences and Nanotechnology, Hannam University, Daejeon 34054, Korea.
You-Kyung LeeDepartment of Biological Sciences and Biotechnology, College of Life Sciences and Nanotechnology, Hannam University, Daejeon 34054, Korea.
Ju-Hui ParkDepartment of Ecological Science, College of Ecology and Environment, Kyungpook National University, Sangju 37224, Korea.
Seung-Hwan LeeDepartment of Ecological Science, College of Ecology and Environment, Kyungpook National University, Sangju 37224, Korea.
Jin-A LeeDepartment of Biological Sciences and Biotechnology, College of Life Sciences and Nanotechnology, Hannam University, Daejeon 34054, Korea.
Deok-Jin JangDepartment of Ecological Science, College of Ecology and Environment, Kyungpook National University, Sangju 37224, Korea.
Kyungpook National University · KRHannam University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The bacterial effector protein RavZ is secreted by the intracellular pathogen Legionella pneumophila and inhibits host autophagy through an irreversible deconjugation of mammalian ATG8 (mATG8) proteins from autophagosome membranes. However, the roles of the LC3 interacting region (LIR) motifs in RavZ function remain unclear. In this study, we show that a membrane-targeting (MT) domain or the LIR motifs of RavZ play major or minor roles in RavZ function. A RavZ mutant that does not bind to mATG8 delipidated all forms of mATG8-phosphatidylethanolamine (PE) as efficiently as did wild-type RavZ. However, a RavZ mutant with a deletion of the MT domain selectively delipidated mATG8-PE less efficiently than did wild-type RavZ. Taken together, our results suggest that the effects of LIR motifs and the MT domain on RavZ activity are complementary and work through independent pathways. [BMB Reports 2019; 52(12): 700-705].

Indexed as

Amino Acid MotifsAnimalsAutophagosomesAutophagyAutophagy-Related Protein 8 FamilyBacterial ProteinsCells, CulturedFibroblastsHEK293 CellsHumansLegionella pneumophilaMiceMicrotubule-Associated ProteinsPhosphatidylethanolaminesProtein Interaction Domains and MotifsAutophagy-Related Protein 8 FamilyBacterial ProteinsMAP1LC3A protein, humanMap1lc3b protein, mouseMicrotubule-Associated ProteinsphosphatidylethanolaminePhosphatidylethanolamines

Identifiers

PMID31722778
PMCPMC6941762
OpenAlexW2998387564

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.