Evidence map›Paper›PMID 31720227›Full record

ArticleMolecular genetics and metabolism reports2019

Characterization of glycan substrates accumulating in GM1 Gangliosidosis.

Roger Lawrence, Jeremy L Van Vleet, Linley Mangini, Adam Harris, Nathan Martin, Wyatt Clark, Sanjay Chandriani, Jonathan H LeBowitz, Roberto Giugliani, Alessandra d'Azzo and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics and metabolism reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Glycosphingolipid Changes in Plasma in Parkinson's Disease Independent of Glucosylceramide Levels.Movement disorders : official journal of the Movement Disorder Society · 2022
    Article
  12. Article
  13. Article
  14. GM1 Gangliosidosis: Mechanisms and Management.The application of clinical genetics · 2021
    Review
  15. GM1 Gangliosidosis-A Mini-Review.Frontiers in genetics · 2021
    Review
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Roger LawrenceResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Jeremy L Van VleetResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Linley ManginiResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Adam HarrisResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Nathan MartinResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Wyatt ClarkResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Sanjay ChandrianiResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Jonathan H LeBowitzResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Roberto GiuglianiMedical Genetics Service, HCPA, Department of Genetics, UFRGS, and INAGEMP, Porto Alegre, Brazil.
Alessandra d'AzzoDepartment of Genetics, St. Jude Children's Research Hospital, Memphis, TN, USA.
Gouri YogalingamResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
Brett E CrawfordResearch, BioMarin Pharmaceutical Inc., Novato, CA 94949, USA.
BioMarin (United States) · USSt. Jude Children's Research Hospital · USUniversidade Federal do Rio Grande do Sul · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionGM1 gangliosidosis is a rare autosomal recessive genetic disorder caused by the disruption of the

objectiveIn this study, we attempt to fully characterize the broad array of GLB1 substrates that require GLB1 for their lysosomal turnover.

resultsUsing tandem mass spectrometry and glycan reductive isotope labeling with data-dependent mass spectrometry, we have confirmed the accumulation of glycolipids (GM1 and GA1) and N-linked glycans with terminal beta-linked galactose. We have also discovered a novel set of core 1 and 2 O-linked glycan metabolites, many of which are part of structurally-related isobaric series that accumulate in disease. In the brain of

conclusionsOur studies illustrate that GLB1 deficiency is not purely a ganglioside accumulation disorder, but instead a broad oligosaccharidosis that include representatives of many β-linked galactose containing glycans and glycoconjugates including glycolipids, N-linked glycans, and various O-linked glycans. Accounting for all β-galactosidase substrates that accumulate when this enzyme is deficient increases our understanding of this severe disorder by identifying metabolites that may drive certain aspects of the disease and may also serve as informative disease biomarkers to fully evaluate the efficacy of future therapies.

Indexed as

A2G2, Oxford glycan naming designation for NA2 glycanBeta-galactosidaseBMP, Bis(monoacylglycero) phosphateDisease biomarkersdp, degree of polymerizationGal, galactoseGLB1GLB1, β-galactosidaseGlcNAc, N-acetylglucosamineGlycan metabolitesGlycoanalysisGM1 gangliosidosisGRIL-LC/MS, glycan reductive isotope labeling liquid chromatography mass spectrometryHex, hexoseHexNAc, N-acetylhexosamineKS, keratan sulfateMan, mannoseMPS, mucopolysaccharidosism/z, mass over chargeNRE, non-reducing endTIC, total ion currentXIC, extracted ion current

Identifiers

PMID31720227
PMCPMC6838976
OpenAlexW2988596702

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.