Evidence map›Paper›PMID 31719654›Full record

ArticleThe ISME journal2020

Biodiversity of protists and nematodes in the wild nonhuman primate gut.

Allison E Mann, Florent Mazel, Matthew A Lemay, Evan Morien, Vincent Billy, Martin Kowalewski, Anthony Di Fiore, Andrés Link, Tony L Goldberg, Stacey Tecot and 11 more

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 73 citations in OpenAlex.

  1. Gut protist diversity in Eurasian beavers (International journal for parasitology. Parasites and wildlife · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 14 institutions in 5 countries.

Allison E MannDepartment of Botany and Biodiversity Research Centre, University of British Columbia, Vancouver, BC, Canada. allison.e.mann@gmail.com.ORCID http://orcid.org/0000-0001-7170-6017
Florent MazelDepartment of Botany and Biodiversity Research Centre, University of British Columbia, Vancouver, BC, Canada.
Matthew A LemayDepartment of Botany and Biodiversity Research Centre, University of British Columbia, Vancouver, BC, Canada.
Evan MorienDepartment of Botany and Biodiversity Research Centre, University of British Columbia, Vancouver, BC, Canada.
Vincent BillyDepartment of Botany and Biodiversity Research Centre, University of British Columbia, Vancouver, BC, Canada.
Martin KowalewskiEstacion Biologica Corrientes (MACN-BR)-CONICET, Corrientes, Argentina.ORCID http://orcid.org/0000-0002-6737-3771
Anthony Di FioreDepartment of Anthropology, University of Texas Austin, Austin, TX, USA.ORCID http://orcid.org/0000-0001-8893-9052
Andrés LinkDepartment of Biological Sciences, Universidad de los Andes, Bogota, Colombia.
Tony L GoldbergDepartment of Pathobiological Science, University of Wisconsin-Madison, Madison, WI, USA.
Stacey TecotSchool of Anthropology, University of Arizona, Tucson, AZ, USA.ORCID http://orcid.org/0000-0002-6640-5049
Andrea L BadenDepartment of Anthropology, Hunter College of City University of New York, New York, NY, USA.
Andres GomezDepartment of Animal Science, University of Minnesota, St. Paul, MN, USA.
Michelle L SautherDepartment of Anthropology, University of Colorado Boulder, Boulder, CO, USA.
Frank P CuozzoLajuma Research Centre, Louis Trichardt (Makhado), Lajuma, South Africa.
Gillian A O RiceDepartment of Anthropology, Dartmouth College, Hanover, NH, USA.
Nathaniel J DominyDepartment of Anthropology, Dartmouth College, Hanover, NH, USA.ORCID http://orcid.org/0000-0001-5916-418X
Rebecca StumpfDepartment of Anthropology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Rebecca J LewisDepartment of Anthropology, University of Texas Austin, Austin, TX, USA.
Larissa SwedellDepartment of Anthropology, Queens College, City University of New York, Flushing, New York, NY, USA.
Katherine AmatoDepartment of Anthropology, Northwestern University, Evanston, IL, USA.
Laura Wegener ParfreyDepartment of Botany and Biodiversity Research Centre, University of British Columbia, Vancouver, BC, Canada. LWParfrey@botany.ubc.ca.
University of British Columbia · CADartmouth College · USThe University of Texas at Austin · USCentro Científico Tecnológico - Nordeste · ARCity University of New York · USNorthwestern University · USQueens College, CUNY · USUniversidad de Los Andes · COUniversity of Arizona · USUniversity of Colorado Boulder · USUniversity of Illinois Urbana-Champaign · USUniversity of Minnesota · USUniversity of North Texas · USUniversity of Wisconsin–Madison · US

Funding

The Impact and Society Ecology of Bacterial Zoonoses in Northern Tanzania: UnderR01TW009237 · FIC · DUKE UNIVERSITY · PI CRUMP, JOHN ANDREW · 2011 to 2014
$1.7M
FIC NIH HHS R01 TW009237
6 · The paper itself

Abstract

Documenting the natural diversity of eukaryotic organisms in the nonhuman primate (NHP) gut is important for understanding the evolution of the mammalian gut microbiome, its role in digestion, health and disease, and the consequences of anthropogenic change on primate biology and conservation. Despite the ecological significance of gut-associated eukaryotes, little is known about the factors that influence their assembly and diversity in mammals. In this study, we used an 18S rRNA gene fragment metabarcoding approach to assess the eukaryotic assemblage of 62 individuals representing 16 NHP species. We find that cercopithecoids, and especially the cercopithecines, have substantially higher alpha diversity than other NHP groups. Gut-associated protists and nematodes are widespread among NHPs, consistent with their ancient association with NHP hosts. However, we do not find a consistent signal of phylosymbiosis or host-species specificity. Rather, gut eukaryotes are only weakly structured by primate phylogeny with minimal signal from diet, in contrast to previous reports of NHP gut bacteria. The results of this study indicate that gut-associated eukaryotes offer different information than gut-associated bacteria and add to our understanding of the structure of the gut microbiome.

Indexed as

BiodiversityGastrointestinal MicrobiomeMetagenomicsAnimalsAnimals, WildBlastocystCercopithecidaeCiliophoraDietEndolimaxEntamoebaEukaryotaFecesFungiHominidaeHost Specificity

Identifiers

PMID31719654
PMCPMC6976604
OpenAlexW2984078263

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.