Evidence map›Paper›PMID 31719168›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2020

Graded Coexpression of Ion Channel, Neurofilament, and Synaptic Genes in Fast-Spiking Vestibular Nucleus Neurons.

Takashi Kodama, Aryn H Gittis, Minyoung Shin, Keith Kelleher, Kristine E Kolkman, Lauren McElvain, Minh Lam, Sascha du Lac

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 38 citations in OpenAlex.

  1. Higher-order interactions in neuronal function: From genes to ionic currents in biophysical models.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Axonal pathology differentially affects human Purkinje cell subpopulations in the essential tremor cerebellum.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Molecular profiling of COComparative biochemistry and physiology. Part A, Molecular & integrative physiology · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Resurgent NaNature communications · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Persistent and resurgent NaJournal of neurophysiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Takashi KodamaJohns Hopkins University School of Medicine, Baltimore, Maryland 21205, takashi@jhmi.edu sascha@jhmi.edu.ORCID 0000-0003-3110-979X
Aryn H GittisSalk Institute for Biological Studies, La Jolla, California, 92037.ORCID 0000-0002-3591-5775
Minyoung ShinHoward Hughes Medical Institute, La Jolla, California, 92037.
Keith KelleherHoward Hughes Medical Institute, La Jolla, California, 92037.
Kristine E KolkmanSalk Institute for Biological Studies, La Jolla, California, 92037.
Lauren McElvainSalk Institute for Biological Studies, La Jolla, California, 92037.
Minh LamJohns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Sascha du LacJohns Hopkins University School of Medicine, Baltimore, Maryland 21205, takashi@jhmi.edu sascha@jhmi.edu.
Salk Institute for Biological Studies · USHoward Hughes Medical Institute · USJohns Hopkins University · US

Funding

CELLULAR ANALYSIS OF THE VESTIBULOOCULAR REFLEXR01EY011027 · NEI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI DU LAC, SASCHA · 1994 to 2018
$6.3M
Howard Hughes Medical InstituteNEI NIH HHS R01 EY011027
6 · The paper itself

Abstract

Computations that require speed and temporal precision are implemented throughout the nervous system by neurons capable of firing at very high rates, rapidly encoding and transmitting a rich amount of information, but with substantial metabolic and physical costs. For economical fast spiking and high throughput information processing, neurons need to optimize multiple biophysical properties in parallel, but the mechanisms of this coordination remain unknown. We hypothesized that coordinated gene expression may underlie the coordinated tuning of the biophysical properties required for rapid firing and signal transmission. Taking advantage of the diversity of fast-spiking cell types in the medial vestibular nucleus of mice of both sexes, we examined the relationship between gene expression, ionic currents, and neuronal firing capacity. Across excitatory and inhibitory cell types, genes encoding voltage-gated ion channels responsible for depolarizing and repolarizing the action potential were tightly coexpressed, and their absolute expression levels increased with maximal firing rate. Remarkably, this coordinated gene expression extended to neurofilaments and specific presynaptic molecules, providing a mechanism for coregulating axon caliber and transmitter release to match firing capacity. These findings suggest the presence of a module of genes, which is coexpressed in a graded manner and jointly tunes multiple biophysical properties for economical differentiation of firing capacity. The graded tuning of fast-spiking capacity by the absolute expression levels of specific ion channels provides a counterexample to the widely held assumption that cell-type-specific firing patterns can be achieved via a vast combination of different ion channels.

Indexed as

Action PotentialsAnimalsAxonsElectrophysiological PhenomenaFemaleGene Expression RegulationGenome-Wide Association StudyIon ChannelsMaleMiceMice, Inbred C57BLNeurofilament ProteinsNeuronsPatch-Clamp TechniquesSynapsesSynaptic TransmissionIon ChannelsNeurofilament Proteinsflocculushigh-frequency firingion channel genesKv3pre-cerebellarsodium channel

Identifiers

PMID31719168
PMCPMC6961989
OpenAlexW2986203418

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.