Evidence map›Paper›PMID 31718556›Full record

ArticleBMC genomics2019

Characterization and discovery of miRNA and miRNA targets from apomictic and sexual genotypes of Eragrostis curvula.

Ingrid Garbus, Juan Pablo Selva, María Cielo Pasten, Andrés Martín Bellido, José Carballo, Emidio Albertini, Viviana Echenique

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 20 citations in OpenAlex.

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  11. Plants (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Ingrid GarbusCentro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS); CONICET, Bahía Blanca, Argentina. igarbus@criba.edu.ar.ORCID http://orcid.org/0000-0001-9646-689X
Juan Pablo SelvaCentro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS); CONICET, Bahía Blanca, Argentina.
María Cielo PastenCentro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS); CONICET, Bahía Blanca, Argentina.
Andrés Martín BellidoCentro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS); CONICET, Bahía Blanca, Argentina.
José CarballoCentro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS); CONICET, Bahía Blanca, Argentina.
Emidio AlbertiniDipartimento di Scienze Agrarie, Alimentari e Ambientali, Università degli Studi di Perugia, Perugia, Italy.
Viviana EcheniqueCentro de Recursos Naturales Renovables de la Zona Semiárida (CERZOS); CONICET, Bahía Blanca, Argentina.
Centro Científico Tecnológico - Bahía Blanca · ARUniversity of Perugia · IT

Funding

Consejo Nacional de Investigaciones Científicas y Técnicas PIP 11220110100767Consejo Nacional de Investigaciones Científicas y Técnicas PIP 11220150100963Fondo para la Investigación Científica y Tecnológica PICT 2013 2029Fondo para la Investigación Científica y Tecnológica PICT Raíces 2014-1243H2020 Marie Skłodowska-Curie Actions 645674
6 · The paper itself

Abstract

backgroundWeeping lovegrass (Eragrostis curvula [Shrad.] Nees) is a perennial grass found in semi-arid regions that is well adapted for growth in sandy soils and drought conditions. E. curvula constitutes a polymorphic complex that includes cytotypes with different ploidy levels (from 2x to 8x), where most polyploids are facultative apomicts, although both sexual reproduction and full apomixis have been reported in this species. Apomixis is thought to be associated with silencing of the sexual pathway, which would involve epigenetic mechanisms. However, a correlation between small RNAs and apomixis has not yet been conclusively established.

resultsAiming to contribute to the elucidation of their role in the expression of apomixis, we constructed small RNA libraries from sexual and apomictic E. curvula genotypes via Illumina technology, characterized the small RNA populations, and conducted differential expression analysis by comparing these small RNAs with the E. curvula reference transcriptome. We found that the expression of two genes is repressed in the sexual genotype, which is associated with specific microRNA expression.

conclusionOur results support the hypothesis that in E. curvula the expression of apomixis leads to sexual repression.

Indexed as

Gene Expression Regulation, PlantBase SequenceConserved SequenceEpigenesis, GeneticEragrostisGenotypeMicroRNAsReproductionReproduction, AsexualRNA, MessengerRNA, Small UntranslatedMicroRNAsRNA, MessengerRNA, Small UntranslatedApomixisEragrostis curvulamiRNAsmiRNA targetSmall RNA libraries

Identifiers

PMID31718556
PMCPMC6852985
OpenAlexW2985043661

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.