Evidence map›Paper›PMID 31718152›Full record

ArticleAnalytical chemistry2019

Resin and Magnetic Nanoparticle-Based Free Radical Probes for Glycan Capture, Isolation, and Structural Characterization.

Kimberly Fabijanczuk, Kaylee Gaspar, Nikunj Desai, Jungeun Lee, Daniel A Thomas, J L Beauchamp, Jinshan Gao

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. RDD-HCD Provides Variable Fragmentation Routes Dictated by Radical Stability.Journal of the American Society for Mass Spectrometry · 2023
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kimberly FabijanczukDepartment of Chemistry and Biochemistry and Center for Quantitative Obesity Research , Montclair State University , Montclair , New Jersey 07043 , United States.
Kaylee GasparDepartment of Chemistry and Biochemistry and Center for Quantitative Obesity Research , Montclair State University , Montclair , New Jersey 07043 , United States.
Nikunj DesaiDepartment of Chemistry and Biochemistry and Center for Quantitative Obesity Research , Montclair State University , Montclair , New Jersey 07043 , United States.
Jungeun LeeDepartment of Chemistry and Biochemistry and Center for Quantitative Obesity Research , Montclair State University , Montclair , New Jersey 07043 , United States.
Daniel A ThomasArthur Amos Noyes Laboratory of Chemical Physics , California Institute of Technology , Pasadena , California 91125 , United States.ORCID 0000-0001-9415-5991
J L BeauchampArthur Amos Noyes Laboratory of Chemical Physics , California Institute of Technology , Pasadena , California 91125 , United States.ORCID 0000-0001-8839-4822
Jinshan GaoDepartment of Chemistry and Biochemistry and Center for Quantitative Obesity Research , Montclair State University , Montclair , New Jersey 07043 , United States.ORCID 0000-0001-9363-785X
Montclair State University · USCalifornia Institute of Technology · US

Funding

Characterization and enrichment of glycoprotein/glycan via multi-functional free radical reagentsR15GM121986 · NIGMS · MONTCLAIR STATE UNIVERSITY · PI GAO, JINSHAN · 2017 to 2017
$357k
NIGMS NIH HHS R15 GM121986
6 · The paper itself

Abstract

By combining the merits of solid supports and free radical activated glycan sequencing (FRAGS) reagents, we develop a multifunctional solid-supported free radical probe (SS-FRAGS) that enables glycan enrichment and characterization. SS-FRAGS comprises a solid support, free radical precursor, disulfide bond, pyridyl, and hydrazine moieties. Thio-activated resin and magnetic nanoparticles (MNPs) are chosen as the solid support to selectively capture free glycans via the hydrazine moiety, allowing for their enrichment and isolation. The disulfide bond acts as a temporary covalent linkage between the solid support and the captured glycan, allowing the release of glycans via the cleavage of the disulfide bond by dithiothreitol. The basic pyridyl functional group provides a site for the formation of a fixed charge, enabling detection by mass spectrometry and avoiding glycan rearrangement during collisional activation. The free radical precursor generates a nascent free radical upon collisional activation and thus simultaneously induces systematic and predictable fragmentation for glycan structure elucidation. A radical-driven glycan deconstruction diagram (R-DECON) is developed to visually summarize the MS

Indexed as

MagneticsCarbohydrate ConformationFree RadicalsMolecular StructureNanoparticlesPolysaccharidesResins, SyntheticFree RadicalsPolysaccharidesResins, Synthetic

Identifiers

PMID31718152
PMCPMC7537365
OpenAlexW2985533179

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.