Evidence map›Paper›PMID 31717732›Full record

ArticleCells2019

Comprehensive Profiling of Surface Gangliosides Extracted from Various Cell Lines by LC-MS/MS.

Jua Lee, Heeyoun Hwang, Sumin Kim, Jaeyun Hwang, Jaekyung Yoon, Dongtan Yin, Sun Il Choi, Yun-Hee Kim, Yong-Sam Kim, Hyun Joo An

Open access · goldAbstract read
In one paragraph

Article in Cells, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jua LeeGraduate School of Analytical Science & Technology, Chungnam National University, Daejeon 34134, Korea.
Heeyoun HwangResearch Center of Bioconvergence Analysis, Korea Basic Science Institute, Cheongju-si 28119, Korea.ORCID 0000-0002-0124-2533
Sumin KimGraduate School of Analytical Science & Technology, Chungnam National University, Daejeon 34134, Korea.
Jaeyun HwangGraduate School of Analytical Science & Technology, Chungnam National University, Daejeon 34134, Korea.
Jaekyung YoonGraduate School of Analytical Science & Technology, Chungnam National University, Daejeon 34134, Korea.
Dongtan YinGraduate School of Analytical Science & Technology, Chungnam National University, Daejeon 34134, Korea.
Sun Il ChoiDepartment of Cancer Biomedical Science, National Cancer Center Graduate School of Cancer Science and Policy, Goyang 10408, Korea.
Yun-Hee KimDepartment of Cancer Biomedical Science, National Cancer Center Graduate School of Cancer Science and Policy, Goyang 10408, Korea.
Yong-Sam KimGenome Editing Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Yuseong-gu, Daejeon 34141, Korea.
Hyun Joo AnGraduate School of Analytical Science & Technology, Chungnam National University, Daejeon 34134, Korea.
Chungnam National University · KRNational Cancer Center · KRKorea Basic Science Institute · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gangliosides act as a surface marker at the outer cellular membrane and play key roles in cancer cell invasion and metastasis. Despite the biological importance of gangliosides, they have been still poorly characterized due to the lack of effective analytical tools. Herein, we performed molecular profiling and structural elucidation of intact gangliosides in various cell lines including CFPAC1, A549, NCI-H358, MCF7, and Caski. We identified and quantified a total of 76 gangliosides on cell membrane using C18 LC-MS/MS. Gangliosides found in each cell line exhibited high complexity and diversity both qualitatively and quantitatively. The most abundant species was GM3(d34:1) in CFPAC1, NCI-H358, and MCF7, while GM2(d34:1) and GM1(d34:1) were major components in A549 and Caski, respectively. Notably, glycan moieties showed more diversity between cancer cell lines than ceramide moieties. In addition, noncancerous pancreatic cell line (hTERT/HPNE) could be distinguished by gangliosides containing different levels of sialic acid compared with cancerous pancreatic cell line (CFPAC1). These results clearly demonstrated the feasibility of our analytical platform to comprehensive profile of cell surface gangliosides for identifying cell types and subgrouping cancer cell types.

Indexed as

Cell LineCell Line, TumorCeramidesChromatography, LiquidGangliosidesHumansPolysaccharidesTandem Mass SpectrometryCeramidesGangliosidesPolysaccharidescancer cellcell surfacegangliosideglycosylationLC-MS/MS

Identifiers

PMID31717732
PMCPMC6912501
OpenAlexW2981352648

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.