Evidence map›Paper›PMID 31716605›Full record

ArticleZootaxa2019

Genomic analysis of the tribe Emesidini (Lepidoptera: Riodinidae).

Jing Zhang, Jinhui Shen, Qian Cong, Nick V Grishin

Abstract read
In one paragraph

Article in Zootaxa, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. A taxonomic overview of theThe taxonomic report of the International Lepidoptera Survey · 2026
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  2. Three butterfly genera across the Central Texas Suture Zone.The taxonomic report of the International Lepidoptera Survey · 2026
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  3. Butterfly taxa discovery via genomic analysis.The taxonomic report of the International Lepidoptera Survey · 2026
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  4. Genomic analysis reveals new subspecies ofThe taxonomic report of the International Lepidoptera Survey · 2026
    Article
  5. Notable Hesperiidae collected by Kilian Roever in Arizona, USA.The taxonomic report of the International Lepidoptera Survey · 2025
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  6. New butterfly taxa and findings from genomic analyses.The taxonomic report of the International Lepidoptera Survey · 2025
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  7. Article
  8. Advancing butterfly systematics through genomic analysis.The taxonomic report of the International Lepidoptera Survey · 2025
    Article
  9. Article
  10. Taxonomic advances driven by the genomic analysis of butterflies.The taxonomic report of the International Lepidoptera Survey · 2024
    Article
  11. New taxa of butterflies supported by genomic analysis.The taxonomic report of the International Lepidoptera Survey · 2024
    Article
  12. Article
  13. Article
  14. Genomic analysis reveals new species and subspecies of butterflies.The taxonomic report of the International Lepidoptera Survey · 2023
    Article
  15. Butterfly classification and species discovery using genomics.The taxonomic report of the International Lepidoptera Survey · 2023
    Article
  16. Taxonomic discoveries enabled by genomic analysis of butterflies.The taxonomic report of the International Lepidoptera Survey · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. A uniquely patterned new species ofTropical lepidoptera research · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jing ZhangDepartments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, and 3Howard Hughes Medical Institute, 5323 Harry Hines Blvd, Dallas, TX, USA 75390-9050. grishin@chop.swmed.edu.
Jinhui Shen
Qian Cong
Nick V Grishin

Funding

Computational analysis of proteinsR35GM127390 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GRISHIN, NICK V. · 2018 to 2022
$1.5M
NIGMS NIH HHS R35 GM127390
6 · The paper itself

Abstract

We obtained and phylogenetically analyzed whole genome shotgun sequences of nearly all species from the tribe Emesidini Seraphim, Freitas Kaminski, 2018 (Riodinidae) and representatives from other Riodinidae tribes. We see that the recently proposed genera Neoapodemia Trujano, 2018 and Plesioarida Trujano García, 2018 are closely allied with Apodemia C. R. Felder, [1865] and are better viewed as its subgenera, new status. Overall, Emesis Fabricius, 1807 and Apodemia (even after inclusion of the two subgenera) are so phylogenetically close that several species have been previously swapped between these two genera. New combinations are: Apodemia (Neoapodemia) zela (Butler, 1870), Apodemia (Neoapodemia) ares (Edwards, 1882), and Apodemia (Neoapodemia) arnacis (Stichel, 1928) (not Emesis); and Emesis phyciodoides (Barnes Benjamin, 1924) (not Apodemia), assigned to each genus by their monophyly in genomic trees with the type species (TS) of the genus. Surprisingly, we find that Emesis emesia Hewitson, 1867 is not grouped with Emesis, but in addition to Apodemia forms a third lineage of similar rank, here named Curvie Grishin, gen. n. (TS: Symmachia emesia Hewitson, 1867). Furthermore, we partition Emesis into 6 subgenera (4 new): Emesis (TS: Hesperia ovidius Fabricius, 1793, a subjective junior synonym of Papilio cereus Linnaeus, 1767), Aphacitis Hübner, [1819] (TS: Papilio dyndima Cramer, [1780], a subjective junior synonym of Papilio lucinda Cramer, [1775]), Poeasia Grishin, subgen. n. (TS: Emesis poeas Godman, [1901]), Mandania Grishin, subgen. n. (TS: Papilio mandana Cramer, [1780]), Brimia Grishin, subgen. n. (TS: Emesis brimo Godman Salvin, 1889), and Tenedia Grishin, subgen. n. (TS: Emesis tenedia C. R. Felder, 1861). Next, genomic comparison of primary type specimens suggests new status for Emesis vimena Schaus, 1928 as a subspecies of Emesis brimo Godman Salvin, 1889, Emesis adelpha Le Cerf, 1958 with E. a. vicaria Le Cerf, 1958 are subspecies of Emesis heteroclita Stichel, 1929, and Emesis tristis Stichel, 1929 is not a synonym of E. brimo vimena but of Emesis lupina Godman Salvin, 1886. A new status of a species is given to the following taxa: Emesis furor A. Butler H. Druce, 1872 (not a subspecies of E. mandana (Cramer, 1780)), Emesis melancholica Stichel, 1916 (not a subspecies of E. lupina Godman Salvin, 1886), Emesis progne (Godman, 1903) (not a subspecies of E. brimo Godman Salvin, 1889), and Emesis opaca Stichel, 1910 (not a synonym of E. lucinda (Cramer, 1775)). Emesis castigata diringeri Gallard 2008 is a subjective junior synonym of E. opaca, new status. Finally, Xanthosa Grishin, gen. n. (TS: Charmona xanthosa Stichel, 1910) is proposed for a sister lineage of Sertania Callaghan Kaminski, 2017 and Befrostia Grishin, gen. n. (TS: Emesis elegia Stichel, 1929) is proposed for a clade without apparent phylogenetic affinities that we place in Befrostiini Grishin, trib. n. In conclusion, genomic data reveal a number of errors in the current classification of Emesidini and allow us to confidently reclassify the tribe partitioning it in three genera: Apodemia, Curvie gen. n. and Emesis.

Indexed as

ButterfliesSea AnemonesAnimal DistributionAnimalsGenomicsPhylogenyLepidoptera, biodiversity, genomic sequencing, museomics, phylogeny, metalmark butterflies

Identifiers

PMID31716605
PMCPMC8958898

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.