Evidence map›Paper›PMID 31714612›Full record

ArticlePlant, cell & environment2020

Comparative spatial lipidomics analysis reveals cellular lipid remodelling in different developmental zones of barley roots in response to salinity.

Lenin D Sarabia, Berin A Boughton, Thusitha Rupasinghe, Damien L Callahan, Camilla B Hill, Ute Roessner

Open access · hybridAbstract read
In one paragraph

Article in Plant, cell & environment, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
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  4. Integrated omics and functional validation identify StGDPD1 as a central regulator of salt stress tolerance in potato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  11. Sample Preparation, Data Acquisition, and Data Analysis forMethods in molecular biology (Clifton, N.J.) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Lenin D SarabiaSchool of BioSciences and Metabolomics Australia, University of Melbourne, Parkville, VIC, 3010, Australia.ORCID 0000-0002-9707-0149
Berin A Boughton
Thusitha Rupasinghe
Damien L CallahanSchool of Life and Environmental Sciences, Centre for Chemistry and Biotechnology, (Burwood Campus), Deakin University, Geelong, Australia, 221 Burwood Highway, Burwood, VIC, 3125, Australia.
Camilla B HillSchool of Veterinary and Life Sciences, Murdoch University, Murdoch, WA, 6150, Australia.
Ute RoessnerSchool of BioSciences and Metabolomics Australia, University of Melbourne, Parkville, VIC, 3010, Australia.
The University of Melbourne · AUDeakin University · AUMurdoch University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salinity-induced metabolic, ionic, and transcript modifications in plants have routinely been studied using whole plant tissues, which do not provide information on spatial tissue responses. The aim of this study was to assess the changes in the lipid profiles in a spatial manner and to quantify the changes in the elemental composition in roots of seedlings of four barley cultivars before and after a short-term salt stress. We used a combination of liquid chromatography-tandem mass spectrometry, inductively coupled plasma mass spectrometry, matrix-assisted laser desorption/ionization mass spectrometry imaging, and reverse transcription - quantitative real time polymerase chain reaction platforms to examine the molecular signatures of lipids, ions, and transcripts in three anatomically different seminal root tissues before and after salt stress. We found significant changes to the levels of major lipid classes including a decrease in the levels of lysoglycerophospholipids, ceramides, and hexosylceramides and an increase in the levels of glycerophospholipids, hydroxylated ceramides, and hexosylceramides. Our results revealed that modifications to lipid and transcript profiles in plant roots in response to a short-term salt stress may involve recycling of major lipid species, such as phosphatidylcholine, via resynthesis from glycerophosphocholine.

Indexed as

SalinityCeramidesChromatography, LiquidGene Expression Regulation, PlantGlycerophospholipidsHordeumIonsLipid MetabolismLipidomicsLipidsMetabolomeMetabolomicsPlant RootsSaltsSalt StressSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationCeramidesGlycerophospholipidsIonsLipidsSaltsbarleyglycerophosphocholinelipidsMALDImass spectrometry imagingmetabolomesalinityspatial metabolomics

Identifiers

PMID31714612
PMCPMC7063987
OpenAlexW2984273550

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.