Evidence map›Paper›PMID 31712678›Full record

ArticleScientific reports2019

Association between the 4p16 genomic locus and different types of congenital heart disease: results from adult survivors in the UK Biobank.

Aldo Córdova-Palomera, James R Priest

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Human Genetics of Atrial Septal Defect.Advances in experimental medicine and biology · 2024
    Review
  3. Considering the Genetic Architecture of Hypoplastic Left Heart Syndrome.Journal of cardiovascular development and disease · 2022
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Aldo Córdova-PalomeraDepartment of Pediatrics, Division of Pediatric Cardiology Stanford University School of Medicine, Stanford, 94304, CA, USA.
James R PriestDepartment of Pediatrics, Division of Pediatric Cardiology Stanford University School of Medicine, Stanford, 94304, CA, USA. jpriest@stanford.edu.ORCID http://orcid.org/0000-0002-8349-4784
Stanford Medicine · USStanford University · US

Funding

Genetic Mechanisms of Congenital Heart DiseaseK99HL130523 · NHLBI · STANFORD UNIVERSITY · PI PRIEST, JAMES R. · 2016 to 2017
$306k
Medical Research Council MC_PC_17228Medical Research Council MC_QA137853NHLBI NIH HHS K99 HL130523
6 · The paper itself

Abstract

Congenital heart disease is the most common birth defect in newborns and the leading cause of death in infancy, affecting nearly 1% of live births. A locus in chromosome 4p16, adjacent to MSX1 and STX18, has been associated with atrial septal defects (ASD) in multiple European and Chinese cohorts. Here, genotyping data from the UK Biobank was used to test for associations between this locus and congenital heart disease in adult survivors of left ventricular outflow tract obstruction (n = 164) and ASD (n = 223), with a control sample of 332,788 individuals, and a meta-analysis of the new and existing ASD data was performed. The results show an association between the previously reported markers at 4p16 and risk for either ASD or left ventricular outflow tract obstruction, with effect sizes similar to the published data (OR between 1.27-1.45; all p < 0.05). Differences in allele frequencies remained constant through the studied age range (40-70 years), indicating that the variants themselves do not drive lethal genetic defects. Meta-analysis shows an OR of 1.35 (95% CI: 1.25-1.46; p < 10

Indexed as

Chromosomes, Human, Pair 4Genetic Association StudiesGenetic LociGenetic Predisposition to DiseaseAllelesBiological Specimen BanksFemaleGenomicsGenotypeHeart Defects, CongenitalHumansMaleOdds RatioSurvivorsUnited Kingdom

Identifiers

PMID31712678
PMCPMC6848143
OpenAlexW2984739585

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.