Evidence map›Paper›PMID 31712655›Full record

ArticleScientific reports2019

Oncogenes, tumor suppressor and differentiation genes represent the oldest human gene classes and evolve concurrently.

A A Makashov, S V Malov, A P Kozlov

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. International journal of molecular sciences · 2023
    Review
  3. Article
  4. The Theory ofGenes · 2022
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

A A MakashovBiomedical Center, Viborgskaya str. 8, Saint-Petersburg, 194044, Russia.
S V MalovTheodosius Dobzhansky Center for Genome Bioinformatics, St.-Petersburg State University, 41A, Sredniy av., St. Petersburg, 199004, Russia.
A P KozlovBiomedical Center, Viborgskaya str. 8, Saint-Petersburg, 194044, Russia. contact@biomed.spb.ru.
Peter the Great St. Petersburg Polytechnic University · RUSt Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Earlier we showed that human genome contains many evolutionarily young or novel genes with tumor-specific or tumor-predominant expression. We suggest calling such genes Tumor Specifically Expressed, Evolutionarily New (TSEEN) genes. In this paper we performed a study of the evolutionary ages of different classes of human genes, using homology searches in genomes of different taxa in human lineage. We discovered that different classes of human genes have different evolutionary ages and confirmed the existence of TSEEN gene classes. On the other hand, we found that oncogenes, tumor-suppressor genes and differentiation genes are among the oldest gene classes in humans and their evolution occurs concurrently. These findings confirm non-trivial predictions made by our hypothesis of the possible evolutionary role of hereditary tumors. The results may be important for better understanding of tumor biology. TSEEN genes may become the best tumor markers.

Indexed as

Evolution, MolecularGenes, Tumor SuppressorGenome, HumanOncogenesAge FactorsBiomarkers, TumorCell DifferentiationCluster AnalysisDatabases, GeneticGene Expression RegulationGenes, EssentialHumansMultigene FamilyNeoplasmsBiomarkers, Tumor

Identifiers

PMID31712655
PMCPMC6848199
OpenAlexW2985743068

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.