Evidence map›Paper›PMID 31712554›Full record

ArticleNature communications2019

KRAS regulation by small non-coding RNAs and SNARE proteins.

Yonglu Che, Zurab Siprashvili, Joanna R Kovalski, Tiffany Jiang, Glenn Wozniak, Lara Elcavage, Paul A Khavari

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. The ancestral type of the R-RAS protein has oncogenic potential.Cellular & molecular biology letters · 2024
    Article
  9. Targeting KRASFrontiers in immunology · 2023
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yonglu CheProgram in Epithelial Biology, Stanford University, Stanford, CA, 94305, USA.
Zurab SiprashviliProgram in Epithelial Biology, Stanford University, Stanford, CA, 94305, USA.
Joanna R KovalskiProgram in Epithelial Biology, Stanford University, Stanford, CA, 94305, USA.
Tiffany JiangProgram in Epithelial Biology, Stanford University, Stanford, CA, 94305, USA.
Glenn WozniakProgram in Epithelial Biology, Stanford University, Stanford, CA, 94305, USA.
Lara ElcavageProgram in Epithelial Biology, Stanford University, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0003-1457-2109
Paul A KhavariProgram in Epithelial Biology, Stanford University, Stanford, CA, 94305, USA. khavari@stanford.edu.ORCID http://orcid.org/0000-0003-0098-4989
Stanford University · USVA Palo Alto Health Care System · US

Funding

Translational Oncology Research Program (Project-005)P30CA124435 · NCI · STANFORD UNIVERSITY · PI Melinda L. Telli · 2007 to 2026
$71.4M
Mechanisms of Epidermal Homeostasis and Early NeoplasiaR01AR043799 · NIAMS · STANFORD UNIVERSITY · PI PAUL KHAVARI · 1998 to 2026
$9.1M
Regulators of TumorigenesisR01CA142635 · NCI · STANFORD UNIVERSITY · PI KHAVARI, PAUL · 2011 to 2020
$3.5M
LTQ Orbitrap XL ETD Mass SpectrometerS10RR027425 · NCRR · STANFORD UNIVERSITY · PI WANDLESS, THOMAS JAMES · 2010 to 2010
$500k
NCI NIH HHS P30 CA124435NCI NIH HHS R01 CA142635NCRR NIH HHS S10 RR027425NIAMS NIH HHS R01 AR043799
6 · The paper itself

Abstract

KRAS receives and relays signals at the plasma membrane (PM) where it transmits extracellular growth factor signals to downstream effectors. SNORD50A/B were recently found to bind KRAS and inhibit its tumorigenic action by unknown mechanisms. KRAS proximity protein labeling was therefore undertaken in SNORD50A/B wild-type and knockout cells, revealing that SNORD50A/B RNAs shape the composition of proteins proximal to KRAS, notably by inhibiting KRAS proximity to the SNARE vesicular transport proteins SNAP23, SNAP29, and VAMP3. To remain enriched on the PM, KRAS undergoes cycles of endocytosis, solubilization, and vesicular transport to the PM. Here we report that SNAREs are essential for the final step of this process, with KRAS localization to the PM facilitated by SNAREs but antagonized by SNORD50A/B. Antagonism between SNORD50A/B RNAs and specific SNARE proteins thus controls KRAS localization, signaling, and tumorigenesis, and disrupting SNARE-enabled KRAS function represents a potential therapeutic opportunity in KRAS-driven cancer.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsCell Line, TumorCell MembraneEndocytosisEndosomesHumansMiceNeoplasmsProtein BindingProtein TransportProto-Oncogene Proteins p21(ras)RNA, Small UntranslatedSignal TransductionSNARE ProteinsKRAS protein, humanProto-Oncogene Proteins p21(ras)RNA, Small UntranslatedSNARE Proteins

Identifiers

PMID31712554
PMCPMC6848142
OpenAlexW2987074689

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.