Evidence map›Paper›PMID 31710619›Full record

ArticlePloS one2019

Bioinformatic analysis of a novel Echinococcus granulosus nuclear receptor with two DNA binding domains.

Gabriela Alvite, Ximena Riera, Saira Cancela, Margot Paulino, Adriana Esteves

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular Cloning and Characterization of aPathogens (Basel, Switzerland) · 2022
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Gabriela AlviteBiochemistry Section, Faculty of Sciences, Universidad de la República, Montevideo, Uruguay.
Ximena RieraBiochemistry Section, Faculty of Sciences, Universidad de la República, Montevideo, Uruguay.
Saira CancelaBiochemistry Section, Faculty of Sciences, Universidad de la República, Montevideo, Uruguay.
Margot PaulinoCenter of Bioinformatics, Departamento de Experimentación y Teoría de la Materia, Faculty of Chemistry, Universidad de la República, Montevideo, Uruguay.
Adriana EstevesBiochemistry Section, Faculty of Sciences, Universidad de la República, Montevideo, Uruguay.ORCID 0000-0002-4804-1800
Universidad de la República de Uruguay · UY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear receptors are ligand-activated transcription factors capable of regulating the expression of complex gene networks. The family includes seven subfamilies of proteins with a wide phylogenetic distribution. A novel subfamily with two DNA-binding domains (2DBDs) has been reported in Schistosoma mansoni (Platyhelminth, Trematoda). This work describes the cDNA cloning and bioinformatics analysis of Eg2DBDα, a 2DBD nuclear receptor isoform from the parasite Echinococcus granulosus (Platyhelminth, Cestoda). The Eg2DBDα gene coding domain structure was analysed. Although two additional 2DBD nuclear receptors are reported in the parasite database GeneDB, they are unlikely to be expressed in the larval stage. Phylogenetic relationships between these atypical proteins from different cestodes are also analysed including S. mansoni 2DBD nuclear receptors. The presence of two DNA binding domains confers particular interest to these nuclear receptors, not only concerning their function but to the development of new antihelminthic drugs.

Indexed as

AnimalsComputational BiologyEchinococcus granulosusHelminth ProteinsPhylogenyProtein IsoformsReceptors, Cytoplasmic and NuclearHelminth ProteinsProtein IsoformsReceptors, Cytoplasmic and Nuclear

Identifiers

PMID31710619
PMCPMC6844482
OpenAlexW2988098370

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.