Evidence map›Paper›PMID 31710598›Full record

ArticlePloS one2019

Discovery of powdery mildew resistance gene candidates from Aegilops biuncialis chromosome 2Mb based on transcriptome sequencing.

Huanhuan Li, Zhenjie Dong, Chao Ma, Xiubin Tian, Zhiguo Xiang, Qing Xia, Pengtao Ma, Wenxuan Liu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

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  9. Identification of New QTLs for Dietary Fiber Content inInternational journal of molecular sciences · 2022
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  11. Review
  12. Review
  13. Article
  14. Molecular Cytogenetic Identification of Wheat-International journal of molecular sciences · 2020
    Article
  15. Physical Mapping ofInternational journal of molecular sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Huanhuan LiCollege of Life Sciences, Henan Agricultural University, Zhengzhou, Henan Province, China.
Zhenjie DongCollege of Life Sciences, Henan Agricultural University, Zhengzhou, Henan Province, China.
Chao MaCollege of Life Sciences, Henan Agricultural University, Zhengzhou, Henan Province, China.
Xiubin TianCollege of Life Sciences, Henan Agricultural University, Zhengzhou, Henan Province, China.
Zhiguo XiangWheat Research Center, Henan Academy of Agricultural Sciences, Zhengzhou, Henan Province, China.
Qing XiaCollege of Life Sciences, Henan Agricultural University, Zhengzhou, Henan Province, China.
Pengtao MaCollege of Life Sciences, Yantai University, Yantai, Shandong Province, China.
Wenxuan LiuCollege of Life Sciences, Henan Agricultural University, Zhengzhou, Henan Province, China.ORCID 0000-0003-1227-0991
Henan Agricultural University · CNHenan Academy of Agricultural Sciences · CNYantai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Powdery mildew is one of the most widespread diseases of wheat. The development and deployment of resistant varieties are one of the most economical and effective methods to manage this disease. Our previous study showed that the gene(s) at 2Mb in Chinese Spring (CS)-Aegilops biuncialis 2Mb disomic addition line TA7733 conferred a high level of resistance to powdery mildew of wheat. In this study, resistance spectrum of TA7733 was assayed by using 15 Blumeria graminis f. sp. tritici (Bgt) isolates prevalent in different regions of China. The result indicated that TA7733 was highly resistant to all tested Bgt isolates and the gene(s) on chromosome 2Mb conferred broad-spectrum resistance to powdery mildew. In order to characterize mechanism of powdery mildew resistance by identifying candidates R-genes derived from Ae. biuncialis chromosome 2Mb and develop 2Mb-specific molecular markers, we performed RNA-seq analysis on TA7733 and CS. In total we identified 7,278 unigenes that showed specific expression in TA7733 pre and post Bgt-infection when compared to CS. Of these 7,278 unigenes, 295 were annotated as putative resistance (R) genes. Comparatively analysis of R-gene sequences from TA7733 and CS and integration CS Ref Seq v1.0 were used to develop R-gene specific primers. Of 295 R-genes we identified 53 R-genes were specific to 2Mb and could be involved in powdery mildew resistance. Functional annotation of majority of the 53 R-genes encoded nucleotide binding leucine rich repeat (NLR) protein. The broad-spectrum resistance to powdery mildew in TA7733 and availability of 2Mb-derived putative candidate R-gene specific molecular markers identified in this study will lay foundations for transferring powdery mildew resistance from 2Mb to common wheat by inducing CS-Ae. biuncialis homoeologous recombination. Our study also provides useful candidates for further isolation and cloning of powdery mildew resistance gene(s) from Ae. biuncialis chromosome 2Mb.

Indexed as

AscomycotaChromosomes, PlantAegilopsDisease ResistancePlant DiseasesPlant ProteinsSequence Analysis, RNATranscriptomePlant Proteins

Identifiers

PMID31710598
PMCPMC6844473
OpenAlexW2987756386

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.