Evidence map›Paper›PMID 31709064›Full record

ArticleIUCrJ2019

CryoEM at 100 keV: a demonstration and prospects.

K Naydenova, G McMullan, M J Peet, Y Lee, P C Edwards, S Chen, E Leahy, S Scotcher, R Henderson, C J Russo

Open access · goldAbstract read
In one paragraph

Article in IUCrJ, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
12.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 110 citations in OpenAlex.

  1. Article
  2. Article
  3. Extending the reach of single-particle cryoEM.Current opinion in structural biology · 2025
    Review
  4. Reducing the effects of radiation damage in cryo-EM using liquid helium temperatures.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. X-Ray Crystallography for Macromolecular Complexes.Advances in experimental medicine and biology · 2024
    Article
  12. Cryo-electron microscopy-based drug design.Frontiers in molecular biosciences · 2024
    Review
  13. Review
  14. Structure determination by cryoEM at 100 keV.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Single-Particle Cryo-EM Data Collection with Stage Tilt using Leginon.Journal of visualized experiments : JoVE · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

K NaydenovaMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
G McMullanMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
M J PeetMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
Y LeeMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
P C EdwardsMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
S ChenMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
E LeahyMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
S ScotcherMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
R HendersonMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
C J RussoMRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
MRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_U105184322Medical Research Council MC_UP_1201/17
6 · The paper itself

Abstract

100 kV is investigated as the operating voltage for single-particle electron cryomicroscopy (cryoEM). Reducing the electron energy from the current standard of 300 or 200 keV offers both cost savings and potentially improved imaging. The latter follows from recent measurements of radiation damage to biological specimens by high-energy electrons, which show that at lower energies there is an increased amount of information available per unit damage. For frozen hydrated specimens around 300 Å in thickness, the predicted optimal electron energy for imaging is 100 keV. Currently available electron cryomicroscopes in the 100-120 keV range are not optimized for cryoEM as they lack both the spatially coherent illumination needed for the high defocus used in cryoEM and imaging detectors optimized for 100 keV electrons. To demonstrate the potential of imaging at 100 kV, the voltage of a standard, commercial 200 kV field-emission gun (FEG) microscope was reduced to 100 kV and a side-entry cryoholder was used. As high-efficiency, large-area cameras are not currently available for 100 keV electrons, a commercial hybrid pixel camera designed for X-ray detection was attached to the camera chamber and was used for low-dose data collection. Using this configuration, five single-particle specimens were imaged: hepatitis B virus capsid, bacterial 70S ribosome, catalase, DNA protection during starvation protein and haemoglobin, ranging in size from 4.5 MDa to 64 kDa with corresponding diameters from 320 to 72 Å. These five data sets were used to reconstruct 3D structures with resolutions between 8.4 and 3.4 Å. Based on this work, the practical advantages and current technological limitations to single-particle cryoEM at 100 keV are considered. These results are also discussed in the context of future microscope development towards the goal of rapid, simple and widely available structure determination of any purified biological specimen.

Indexed as

advances in microscope hardwaredirect detectorselectron cryomicroscopylow-dose electron microscopysingle-particle cryoEMsingle-particle reconstructionstructure determination

Identifiers

PMID31709064
PMCPMC6830209
OpenAlexW2979844330

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.