Evidence map›Paper›PMID 31709017›Full record

ArticleMobile DNA2019

High frequency of horizontal transfer in Jockey families (LINE order) of drosophilids.

Izabella L Tambones, Annabelle Haudry, Maryanna C Simão, Claudia M A Carareto

Open access · goldAbstract read
In one paragraph

Article in Mobile DNA, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Izabella L Tambones1Department of Biology, Institute of Biosciences, Humanities and Exact Sciences (IBILCE), UNESP - São Paulo State University, Campus São José do Rio Preto, São Paulo, SP 15054-000 Brazil.
Annabelle Haudry2Laboratoire de Biométrie et Biologie Evolutive, Université de Lyon, Université Lyon 1, CNRS, UMR 5558, F-69622 Villeurbanne, France.
Maryanna C Simão1Department of Biology, Institute of Biosciences, Humanities and Exact Sciences (IBILCE), UNESP - São Paulo State University, Campus São José do Rio Preto, São Paulo, SP 15054-000 Brazil.
Claudia M A Carareto1Department of Biology, Institute of Biosciences, Humanities and Exact Sciences (IBILCE), UNESP - São Paulo State University, Campus São José do Rio Preto, São Paulo, SP 15054-000 Brazil.ORCID 0000-0002-0298-1354
Universidade Estadual Paulista (Unesp) · BRUniversité Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe use of large-scale genomic analyses has resulted in an improvement of transposable element sampling and a significant increase in the number of reported HTT (horizontal transfer of transposable elements) events by expanding the sampling of transposable element sequences in general and of specific families of these elements in particular, which were previously poorly sampled. In this study, we investigated the occurrence of HTT events in a group of elements that, until recently, were uncommon among the HTT records in

resultsPhylogenetic analyses revealed 72 Jockey families in 41 genomes. Combined analyses revealed 15 potential HTT events between species belonging to different genera and species groups of Drosophilidae, providing evidence for the flow of genetic material favoured by the spatio-temporal sharing of these species present in the Palaeartic or Afrotropical region.

conclusionsOur results provide phylogenetic, biogeographic and temporal evidence of horizontal transfers of the Jockey elements, increase the number of rare records of HTT in specific families of LINE elements, increase the number of known occurrences of these events, and enable a broad understanding of the evolutionary dynamics of these elements and the host species.

Indexed as

DrosophilaHTTScaptodrosophilatransposable elementsVHICAZaprionus

Identifiers

PMID31709017
PMCPMC6829985
OpenAlexW2987828718

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.