Evidence map›Paper›PMID 31709002›Full record

ArticleAlgorithms for molecular biology : AMB2019

Super short operations on both gene order and intergenic sizes.

Andre R Oliveira, Géraldine Jean, Guillaume Fertin, Ulisses Dias, Zanoni Dias

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Algorithms for molecular biology : AMB, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Rearrangement Events on Circular Genomes.Bulletin of mathematical biology · 2023
    Article
  2. A new algebraic approach to genome rearrangement models.Journal of mathematical biology · 2022
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Andre R Oliveira1Institute of Computing, University of Campinas, Campinas, Brazil.ORCID 0000-0002-0568-1859
Géraldine Jean2LS2N, UMR CNRS 6004, University of Nantes, Nantes, France.ORCID 0000-0002-1534-2682
Guillaume Fertin2LS2N, UMR CNRS 6004, University of Nantes, Nantes, France.ORCID 0000-0002-8251-2012
Ulisses Dias3School of Technology, University of Campinas, Limeira, Brazil.ORCID 0000-0002-4763-3046
Zanoni Dias1Institute of Computing, University of Campinas, Campinas, Brazil.ORCID 0000-0003-3333-6822
Universidade Estadual de Campinas (UNICAMP) · BRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe evolutionary distance between two genomes can be estimated by computing a minimum length sequence of operations, called RESULTS AND

conclusionsIn this work, we investigate the problem of computing the distance between two genomes, taking into account both gene order and intergenic sizes. The genome rearrangement operations we consider here are constrained types of reversals and transpositions, called

Indexed as

Approximation algorithmsGenome rearrangementsIntergenic regionsSuper short operations

Identifiers

PMID31709002
PMCPMC6833170
OpenAlexW2985875441

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.