Evidence map›Paper›PMID 31707568›Full record

ArticleFish physiology and biochemistry2020

Trypsin gene expression in adults and larvae of tropical gar Atractosteus tropicus.

Kristal de M Jesús-De la Cruz, Ángela Ávila-Fernández, Emyr Saúl Peña-Marín, Luis Daniel Jiménez-Martínez, Dariel Tovar-Ramírez, Rafael Martínez-García, Rocio Guerrero-Zárate, Gloria Gertrudys Asencio-Alcudia, Carlos Alfonso Alvarez-González

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In one paragraph

Article in Fish physiology and biochemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Kristal de M Jesús-De la CruzLaboratorio de Acuicultura Tropical, DACBiol-UJAT, Carretera Villahermosa-Cárdenas Km 0.5, C.P. 86139, Villahermosa, Tabasco, Mexico.
Ángela Ávila-FernándezLaboratorio de Biología Molecular y Biotecnología, DACS-UJAT, Avenida Gregorio Méndez 2838-A Col. Tamulté, C.P. 86100, Villahermosa, Tabasco, Mexico.
Emyr Saúl Peña-MarínLaboratorio de Acuicultura Tropical, DACBiol-UJAT, Carretera Villahermosa-Cárdenas Km 0.5, C.P. 86139, Villahermosa, Tabasco, Mexico.
Luis Daniel Jiménez-MartínezLaboratorio de Acuicultura Tropical, DACBiol-UJAT, Carretera Villahermosa-Cárdenas Km 0.5, C.P. 86139, Villahermosa, Tabasco, Mexico.
Dariel Tovar-RamírezLaboratorio de Fisiología Comparada y Genómica Funcional, Centro de Investigaciones Biológicas del Noroeste, S.C. Instituto Politécnico Nacional 195, Colonia Playa Palo de Santa Rita Sur, C.P. 23096, La Paz, B.C.S, Mexico.
Rafael Martínez-GarcíaLaboratorio de Acuicultura Tropical, DACBiol-UJAT, Carretera Villahermosa-Cárdenas Km 0.5, C.P. 86139, Villahermosa, Tabasco, Mexico.
Rocio Guerrero-ZárateLaboratorio de Acuicultura Tropical, DACBiol-UJAT, Carretera Villahermosa-Cárdenas Km 0.5, C.P. 86139, Villahermosa, Tabasco, Mexico.
Gloria Gertrudys Asencio-AlcudiaLaboratorio de Acuicultura Tropical, DACBiol-UJAT, Carretera Villahermosa-Cárdenas Km 0.5, C.P. 86139, Villahermosa, Tabasco, Mexico.
Carlos Alfonso Alvarez-GonzálezLaboratorio de Acuicultura Tropical, DACBiol-UJAT, Carretera Villahermosa-Cárdenas Km 0.5, C.P. 86139, Villahermosa, Tabasco, Mexico. alvarez_alfonso@hotmail.com.ORCID http://orcid.org/0000-0001-9240-0041
Universidad Juárez Autónoma de Tabasco · MXInstituto Politécnico Nacional · MX

Funding

CONACYT CB-2016-1-282765CONACYT SAGARPA-2011-08-164673
6 · The paper itself

Abstract

Trypsin gene (try) expression levels were quantified in different organs of wild and captive tropical gar (Atractosteus tropicus) adults, and changes in expression during initial ontogeny of the species were determined. RNA was extracted from the pancreas, and cDNA was synthesized and later amplified by endpoint PCR using oligonucleotides designed from different try sequences of fish registered in GenBank. Subsequently, specific oligonucleotides were designed from the partial sequences. Gene expression was measured after RNA extraction and synthesis of the cDNA of 11 organs (liver, pancreas, stomach, esophagus, intestine, pyloric caeca, brain, muscle, gills, gonad, and kidney) of captive and wild adults. Likewise, samples of A. tropicus larvae were taken on days 0 (embryo), 5, 10, 15, 20, 25, and 30 days after hatching (DAH), the RNA was extracted, and the synthesis of cDNA was carried out to measure real-time gene expression (qPCR). The results showed that the highest relative try expression occurred mainly in the esophagus, liver, stomach, and pancreas of both wild and captive adult fish; however, captive organisms had a higher try expression level than wild fish. Although try expression during initial ontogeny was high in embryos (0 DAH), it did not reach the maximum value until 15 DAH. It was concluded that try expression levels in captive adults are due to the high protein content in the balanced feed (trout diet). The highest try expression level during larviculture was detected at 15 DAH, which indicates that A. tropicus larvae have a mature digestive system and can efficiently hydrolyze proteins from feed at this developmental stage.

Indexed as

AnimalsFishesFish ProteinsGene ExpressionTrypsinFish ProteinsTrypsinAtractosteus tropicusExpressionGeneProteasesTrypsin

Identifiers

PMID31707568
OpenAlexW2985842170

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.