Evidence map›Paper›PMID 31705726›Full record

ArticleHuman mutation2020

CSGALNACT1-congenital disorder of glycosylation: A mild skeletal dysplasia with advanced bone age.

Shuji Mizumoto, Andreas R Janecke, Azita Sadeghpour, Gundula Povysil, Marie T McDonald, Sheila Unger, Susanne Greber-Platzer, Kristen L Deak, Nicholas Katsanis, Andrea Superti-Furga and 4 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in Human mutation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Endocrine Implications of Congenital Disorders of GlycosylationJournal of clinical research in pediatric endocrinology · 2026
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  11. JPGN reports · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 9 institutions in 6 countries.

Shuji MizumotoDepartment of Pathobiochemistry, Faculty of Pharmacy, Meijo University, Nagoya, Japan.
Andreas R JaneckeDepartment of Pediatrics I, Medical University of Innsbruck, Innsbruck, Austria.ORCID 0000-0001-7155-0315
Azita SadeghpourCenter for Human Disease Modeling, Duke University Medical Center, Durham, North Carolina.
Gundula PovysilInstitute of Bioinformatics, Johannes Kepler University, Linz, Austria.
Marie T McDonaldDepartment of Pediatrics, Division of Medical Genetics, Duke University Medical Center, Durham, North Carolina.
Sheila UngerDepartment of Medical Genetics, Centre Hospitalier Universitaire Vaudois, University of Lausanne, Lausanne, Switzerland.
Susanne Greber-PlatzerDepartment of Pediatrics and Adolescent Medicine, Comprehensive Center for Pediatrics, Medical University of Vienna, Vienna, Austria.
Kristen L DeakDepartment of Pathology, Duke University Medical Center, Durham, North Carolina.
Nicholas KatsanisCenter for Human Disease Modeling, Duke University Medical Center, Durham, North Carolina.ORCID 0000-0002-2480-0171
Andrea Superti-FurgaDepartment of Pediatrics, Centre Hospitalier Universitaire Vaudois, University of Lausanne, Lausanne, Switzerland.
Kazuyuki SugaharaDepartment of Pathobiochemistry, Faculty of Pharmacy, Meijo University, Nagoya, Japan.
Erica E DavisCenter for Human Disease Modeling, Duke University Medical Center, Durham, North Carolina.ORCID 0000-0002-2412-8397
Shuhei YamadaDepartment of Pathobiochemistry, Faculty of Pharmacy, Meijo University, Nagoya, Japan.
Julia VodopiutzDepartment of Pediatrics and Adolescent Medicine, Comprehensive Center for Pediatrics, Medical University of Vienna, Vienna, Austria.ORCID 0000-0002-8087-7026
Comprehensive Cancer Center Vienna · ATDuke Medical Center · USMeijo University · JPNorthwestern University · USUniversity Hospital of Lausanne · CHCenter for Human Genetics · USDunedin Public Hospital · NZInnsbruck Medical University · ATJohannes Kepler University of Linz · AT

Funding

Functional Dissection of CNVs in Neurodevelopmental TraitsR01MH106826 · NIMH · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2015 to 2025
$4.6M
NIMH NIH HHS R01 MH106826
6 · The paper itself

Abstract

Congenital disorders of glycosylation (CDGs) comprise a large number of inherited metabolic defects that affect the biosynthesis and attachment of glycans. CDGs manifest as a broad spectrum of disease, most often including neurodevelopmental and skeletal abnormalities and skin laxity. Two patients with biallelic CSGALNACT1 variants and a mild skeletal dysplasia have been described previously. We investigated two unrelated patients presenting with short stature with advanced bone age, facial dysmorphism, and mild language delay, in whom trio-exome sequencing identified novel biallelic CSGALNACT1 variants: compound heterozygosity for c.1294G>T (p.Asp432Tyr) and the deletion of exon 4 that includes the start codon in one patient, and homozygosity for c.791A>G (p.Asn264Ser) in the other patient. CSGALNACT1 encodes CSGalNAcT-1, a key enzyme in the biosynthesis of sulfated glycosaminoglycans chondroitin and dermatan sulfate. Biochemical studies demonstrated significantly reduced CSGalNAcT-1 activity of the novel missense variants, as reported previously for the p.Pro384Arg variant. Altered levels of chondroitin, dermatan, and heparan sulfate moieties were observed in patients' fibroblasts compared to controls. Our data indicate that biallelic loss-of-function mutations in CSGALNACT1 disturb glycosaminoglycan synthesis and cause a mild skeletal dysplasia with advanced bone age, CSGALNACT1-CDG.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseMutationAmino Acid SequenceBone and BonesCongenital Disorders of GlycosylationFaciesFemaleHigh-Throughput Nucleotide SequencingHumansInfant, NewbornLoss of Function MutationMaleMusculoskeletal AbnormalitiesMutation, MissenseN-Acetylgalactosaminyltransferaseschondroitin sulfate N-acetylgalactosaminyltransferase-1N-Acetylgalactosaminyltransferasesadvanced bone agecartilage and brain developmentCSGalNAcT-1CSGALNACT1-CDGglycosaminoglycanjoint laxitymacrocephalyproteoglycanshort stature

Identifiers

PMID31705726
PMCPMC7027858
OpenAlexW2987577403

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.