Evidence map›Paper›PMID 31705217›Full record

ArticleJournal of industrial microbiology & biotechnology2020

Construction of a new integrating vector from actinophage ϕOZJ and its use in multiplex Streptomyces transformation.

Bryan Ko, John D'Alessandro, Lee Douangkeomany, Spencer Stumpf, Ashby deButts, Joshua Blodgett

Open access · bronzeAbstract read
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In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  4. Current Approaches for Genetic Manipulation ofBiotech (Basel (Switzerland)) · 2025
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  6. Discovery of unusual dimeric piperazyl cyclopeptides encoded by aProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. A comparative metabologenomic approach reveals mechanistic insights intoProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Review
  9. Article
  10. Frontiers in bioengineering and biotechnology · 2021
    Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Bryan KoDepartment of Biology, Washington University in St Louis, St Louis, MO, 63130, USA.
John D'AlessandroDepartment of Biology, Washington University in St Louis, St Louis, MO, 63130, USA.
Lee DouangkeomanyDepartment of Biology, Washington University in St Louis, St Louis, MO, 63130, USA.
Spencer StumpfDepartment of Biology, Washington University in St Louis, St Louis, MO, 63130, USA.
Ashby deButtsDepartment of Biology, Washington University in St Louis, St Louis, MO, 63130, USA.
Joshua BlodgettDepartment of Biology, Washington University in St Louis, St Louis, MO, 63130, USA. jblodgett@wustl.edu.ORCID http://orcid.org/0000-0002-7080-5870
Washington University in St. Louis · US

Funding

Directorate for Biological Sciences 1846005
6 · The paper itself

Abstract

Streptomyces and other closely-related actinobacteria are important sources of bioactive molecules. Streptomyces synthetic biology and genetics empower therapeutic and agrichemical development through strain improvement and biosynthetic understanding. Such efforts rely on the availability of developed molecular toolsets. Among these tools, vectors that enable combinatorial chromosomal manipulations are particularly desirable. Towards developing tools for facile multiplex engineering, we herein describe the development of new integrating vectors derived from BD1 subgroup actinophage OzzyJ (ϕOZJ). By demonstrating the transformation of several Streptomyces spp. using ϕOZJ-derived vectors, we reveal their potential for strain engineering. We further report the development of new ϕC31 and ϕBT1-based vectors having orthogonal resistance, replication and integration features for concomitant transformation with our ϕOZJ-derived vectors. Importantly, the resulting compatible vector panel enabled us to demonstrate the transfer of up to three plasmids each into Streptomyces venezuelae, Streptomyces roseosporus and Streptomyces pristinaespiralis during a single conjugation experiment. To our knowledge this is the first documentation of conjugation-mediated multiplex plasmid transformation, a useful approach for rapid combinatorial strain development.

Indexed as

Genetic VectorsActinobacteriaBacteriophagesPlasmidsStreptomycesSynthetic BiologyIntergeneric conjugationMultiplex transformationSite- integrating vectorsStreptomycesϕOZJ

Identifiers

PMID31705217
OpenAlexW2985013064

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.