Evidence map›Paper›PMID 31704733›Full record

ArticleMolecular cancer research : MCR2020

Lysine-Specific Demethylase 1 Mediates AKT Activity and Promotes Epithelial-to-Mesenchymal Transition in

Samuel A Miller, Robert A Policastro, Sudha S Savant, Shruthi Sriramkumar, Ning Ding, Xiaoyu Lu, Helai P Mohammad, Sha Cao, Jay H Kalin, Philip A Cole and 2 more

Open access · greenAbstract read
In one paragraph

Article in Molecular cancer research : MCR, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Samuel A MillerGenome, Cell, and Developmental Biology, Department of Biology, Indiana University Bloomington, Bloomington, Indiana.
Robert A PolicastroGenome, Cell, and Developmental Biology, Department of Biology, Indiana University Bloomington, Bloomington, Indiana.
Sudha S SavantMedical Sciences Program, Indiana University School of Medicine, Bloomington, Indiana.
Shruthi SriramkumarMedical Sciences Program, Indiana University School of Medicine, Bloomington, Indiana.ORCID 0000-0003-1308-2546
Ning DingMedical Sciences Program, Indiana University School of Medicine, Bloomington, Indiana.
Xiaoyu LuCenter for Computational Biology and Bioinformatics, Department of Biostatistics, Indiana University School of Medicine, Indianapolis, Indiana.
Helai P MohammadEpigenetics Research Unit, Oncology, GlaxoSmithKline, Collegeville, Pennsylvania.
Sha CaoDepartment of Biohealth Informatics, Indiana University-Purdue University, Indianapolis, Indiana.ORCID 0000-0002-8645-848X
Jay H KalinDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-8747-6022
Philip A ColeDivision of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.
Gabriel E ZentnerGenome, Cell, and Developmental Biology, Department of Biology, Indiana University Bloomington, Bloomington, Indiana.ORCID 0000-0002-0801-7646
Heather M O'HaganMedical Sciences Program, Indiana University School of Medicine, Bloomington, Indiana. hmohagan@indiana.edu.ORCID 0000-0001-9750-5088
Indiana University Bloomington · USBrigham and Women's Hospital · USIndiana University Health · USIndiana University – Purdue University Indianapolis · USGlaxoSmithKline (United States) · US

Funding

Indiana Clinical and Translational Sciences InstituteUL1TR001108 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI DENNE, SCOTT C., SHEKHAR, ANANTHA · 2013 to 2017
$23.3M
Chemical Approaches to Protein PhosphorylationR01CA074305 · NCI · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2002 to 2025
$8.0M
Protein Acylation and Methylation Mechanisms_Administrative SupplementR37GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2013 to 2022
$4.1M
Mechanisms &Inhibition of Histone AcetyltransferasesR01GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2001 to 2012
$3.8M
Indiana Clinical and Translational Sciences InstituteTL1TR001107 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI DENNE, SCOTT C., SHEKHAR, ANANTHA · 2013 to 2017
$2.0M
Toxin-Associated Oxidative DNA Damage Initiates Tumor-Specific Epigenetic ChangesR01ES023183 · NIEHS · INDIANA UNIVERSITY INDIANAPOLIS · PI O'HAGAN, HEATHER M · 2013 to 2016
$1.6M
NCATS NIH HHS TL1 TR001107NCATS NIH HHS UL1 TR001108NCI NIH HHS R01 CA074305NIEHS NIH HHS R01 ES023183NIGMS NIH HHS R01 GM062437NIGMS NIH HHS R37 GM062437
6 · The paper itself

Abstract

Activation of the epithelial-to-mesenchymal transition (EMT) program is a critical mechanism for initiating cancer progression and migration. Colorectal cancers contain many genetic and epigenetic alterations that can contribute to EMT. Mutations activating the PI3K/AKT signaling pathway are observed in >40% of patients with colorectal cancer contributing to increased invasion and metastasis. Little is known about how oncogenic signaling pathways such as PI3K/AKT synergize with chromatin modifiers to activate the EMT program. Lysine-specific demethylase 1 (LSD1) is a chromatin-modifying enzyme that is overexpressed in colorectal cancer and enhances cell migration. In this study, we determine that LSD1 expression is significantly elevated in patients with colorectal cancer with mutation of the catalytic subunit of PI3K,

Indexed as

Cell Line, TumorChromatinClass I Phosphatidylinositol 3-KinasesColorectal NeoplasmsEpithelial-Mesenchymal TransitionGene Knockout TechniquesHCT116 CellsHistone DemethylasesHT29 CellsHumansMutationPhosphorylationProtein StabilityProto-Oncogene Proteins c-aktSnail Family Transcription FactorsTransfectionChromatinClass I Phosphatidylinositol 3-KinasesHistone DemethylasesKDM1A protein, humanPIK3CA protein, humanProto-Oncogene Proteins c-aktSNAI1 protein, humanSnail Family Transcription Factors

Identifiers

PMID31704733
PMCPMC7002231
OpenAlexW2989523546

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.