Evidence map›Paper›PMID 31704587›Full record

ArticleMolecular therapy. Nucleic acids2019

Theranostic Application of a Novel G-Quadruplex-Forming DNA Aptamer Targeting Malate Synthase of Mycobacterium tuberculosis.

Abhijeet Dhiman, Chanchal Kumar, Subodh Kumar Mishra, Kriti Sikri, Ishara Datta, Pradeep Sharma, Tej P Singh, Sagarika Haldar, Neera Sharma, Anjali Bansal and 4 more

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Aptamers: precision tools for diagnosing and treating infectious diseases.Frontiers in cellular and infection microbiology · 2024
    Review
  3. Article
  4. Article
  5. Review
  6. Aptamers: An Emerging Tool for Diagnosis and Therapeutics in Tuberculosis.Frontiers in cellular and infection microbiology · 2021
    Review
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 1 country.

Abhijeet DhimanDepartment of Biotechnology, All India Institute of Medical Sciences, New Delhi 110029, India; Faculty of Pharmacy, Uttarakhand Technical University, Dehradun 248007, Uttarakhand, India.
Chanchal KumarDepartment of Biotechnology, All India Institute of Medical Sciences, New Delhi 110029, India.
Subodh Kumar MishraDiscipline of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Simrol, Indore 453552, India.
Kriti SikriDepartment of Biotechnology, All India Institute of Medical Sciences, New Delhi 110029, India.
Ishara DattaDepartment of Biotechnology, All India Institute of Medical Sciences, New Delhi 110029, India.
Pradeep SharmaDepartment of Biophysics, All India Institute of Medical Sciences, New Delhi 110029, India.
Tej P SinghDepartment of Biophysics, All India Institute of Medical Sciences, New Delhi 110029, India.
Sagarika HaldarDepartment of Experimental Medicine and Biotechnology, PGIMER, Sector 12, Chandigarh 160012, India; Multidisciplinary Clinical and Translational Research Group, Translational Health Science and Technology Institute, Faridabad, Haryana 121001, India.
Neera SharmaDepartment of Biochemistry, Dr. Ram Manohar Lohia Hospital, New Delhi 110001, India.
Anjali BansalDepartment of Pediatrics, Dr. Ram Manohar Lohia Hospital, New Delhi 110001, India.
Yusra AhmadFaculty of Pharmacy, Uttarakhand Technical University, Dehradun 248007, Uttarakhand, India.
Amit KumarDiscipline of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Simrol, Indore 453552, India.
Tarun Kumar SharmaMultidisciplinary Clinical and Translational Research Group, Translational Health Science and Technology Institute, Faridabad, Haryana 121001, India. Electronic address: tarun@thsti.res.in.
Jaya Sivaswami TyagiDepartment of Biotechnology, All India Institute of Medical Sciences, New Delhi 110029, India; Multidisciplinary Clinical and Translational Research Group, Translational Health Science and Technology Institute, Faridabad, Haryana 121001, India. Electronic address: jayatyagi.aiims@gmail.com.
All India Institute of Medical Sciences · INAtal Bihari Vajpayee Institute of Medical Sciences and Dr. Ram Manohar Lohia Hospital · INDepartment of Biotechnology · INIndian Institute of Technology Indore · INPost Graduate Institute of Medical Education and Research · INTranslational Health Science and Technology Institute · INUttarakhand Technical University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The successful management of tuberculosis (TB) requires efficient diagnosis and treatment. Further, the increasing prevalence of drug-resistant TB highlights the urgent need to develop novel inhibitors against both drug-susceptible and drug-resistant forms of disease. Malate synthase (MS), an enzyme of the glyoxylate pathway, plays a vital role in mycobacterial persistence, and therefore it is considered as an attractive target for novel anti-TB drug development. Recent studies have also ascribed an adhesin function to MS and established it as a potent diagnostic biomarker. In this study, a panel of Mycobacterium tuberculosis (Mtb) MS-specific single-stranded DNA aptamers was identified by Systematic Evolution of Ligands by EXponential enrichment (SELEX). The best-performing G-quadruplex-forming 44-mer aptamer, MS10, was optimized post-SELEX to generate an 11-mer aptamer, MS10-Trunc. This aptamer was characterized by various biochemical, biophysical, and in silico techniques. Its theranostic activity toward Mtb was established using enzyme inhibition, host cell binding, and invasion assays. MS10-Trunc aptamer exhibited high affinity for MS (equilibrium dissociation constant [K

Identifiers

PMID31704587
PMCPMC6849348
OpenAlexW2979020365

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.