Evidence map›Paper›PMID 31703692›Full record

ArticleBMC genomics2019

Effects of parental genetic divergence on gene expression patterns in interspecific hybrids of Camellia.

Min Zhang, Yi-Wei Tang, Ji Qi, Xin-Kai Liu, Dan-Feng Yan, Nai-Sheng Zhong, Nai-Qi Tao, Ji-Yin Gao, Yu-Guo Wang, Zhi-Ping Song and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Min ZhangCo-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, Nanjing, 210037, China.
Yi-Wei TangMinistry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Ji QiMinistry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Xin-Kai LiuPalm Eco-Town Development Co, Ltd, Guangzhou, 510627, Guangdong, China.
Dan-Feng YanPalm Eco-Town Development Co, Ltd, Guangzhou, 510627, Guangdong, China.
Nai-Sheng ZhongPalm Eco-Town Development Co, Ltd, Guangzhou, 510627, Guangdong, China.
Nai-Qi TaoMinistry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Ji-Yin GaoPalm Eco-Town Development Co, Ltd, Guangzhou, 510627, Guangdong, China.
Yu-Guo WangMinistry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Zhi-Ping SongMinistry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Ji YangMinistry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China.
Wen-Ju ZhangMinistry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, 200438, China. wjzhang@fudan.edu.cn.ORCID http://orcid.org/0000-0003-1105-9465
Fudan University · CNChinese Academy of Forestry · CNNanjing Forestry University · CN

Funding

Key Research and Development Program of Guangdong Province 2018B0202020002National Natural Science Foundation of China 31270407National Natural Science Foundation of China 31670223
6 · The paper itself

Abstract

backgroundThe merging of two divergent genomes during hybridization can result in the remodeling of parental gene expression in hybrids. A molecular basis underling expression change in hybrid is regulatory divergence, which may change with the parental genetic divergence. However, there still no unanimous conclusion for this hypothesis.

resultsThree species of Camellia with a range of genetic divergence and their F

conclusionsThe discordance within hybrid would intensify as the parents become more divergent, manifesting as more DEGs would be non-additively expressed. Trans-regulatory divergence contributed more to the additively inherited genes than cis, however, its contribution to expression difference would be weakened as cis mutations accumulated over time; and this might be an important reason for that the more divergent the parents are, the greater proportion of DEGs would be non-additively expressed in hybrid.

Indexed as

Gene Expression ProfilingGenetic VariationHybridization, GeneticAllelesCamelliaGenomicsAllelic expressionCamelliaCis- and trans- regulationHybridizationTranscriptome shock

Identifiers

PMID31703692
PMCPMC6842218
OpenAlexW2984837702

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.