Evidence map›Paper›PMID 31703457›Full record

ArticleGenes2019

ARPNet: Antidepressant Response Prediction Network for Major Depressive Disorder.

Buru Chang, Yonghwa Choi, Minji Jeon, Junhyun Lee, Kyu-Man Han, Aram Kim, Byung-Joo Ham, Jaewoo Kang

Abstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Pharmaco-Multiomics: A New Frontier in Precision Psychiatry.International journal of molecular sciences · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Precision medicine in mood disorders.PCN reports : psychiatry and clinical neurosciences · 2022
    Review
  12. Machine Learning and Deep Learning for the Pharmacogenomics of Antidepressant Treatments.Clinical psychopharmacology and neuroscience : the official scientific journal of the Korean College of Neuropsychopharmacology · 2021
    Review
  13. Review
  14. Article
  15. Review
  16. Challenges and Future Prospects of Precision Medicine in Psychiatry.Pharmacogenomics and personalized medicine · 2020
    Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Buru ChangDepartment of Computer Science and Engineering, Korea University, Seoul 02841, Korea.
Yonghwa ChoiDepartment of Computer Science and Engineering, Korea University, Seoul 02841, Korea.
Minji JeonDepartment of Computer Science and Engineering, Korea University, Seoul 02841, Korea.
Junhyun LeeDepartment of Computer Science and Engineering, Korea University, Seoul 02841, Korea.
Kyu-Man HanDepartment of Psychiatry, Korea University Anam Hospital, Korea University College of Medicine, Seoul 02841, Korea.
Aram KimDepartment of Biomedical Sciences, Korea University College of Medicine, Seoul 02841, Korea.
Byung-Joo HamDepartment of Psychiatry, Korea University Anam Hospital, Korea University College of Medicine, Seoul 02841, Korea.ORCID 0000-0002-0108-2058
Jaewoo KangDepartment of Computer Science and Engineering, Korea University, Seoul 02841, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Treating patients with major depressive disorder is challenging because it takes several months for antidepressants prescribed for the patients to take effect. This limitation may result in increased risks and treatment costs. To address this limitation, an accurate antidepressant response prediction model is needed. Recently, several studies have proposed models that extract useful features such as neuroimaging biomarkers and genetic variants from patient data, and use them as predictors for predicting the antidepressant responses of patients. However, it is impossible to utilize all the different types of predictors when making a clinical decision on what drugs to prescribe for a patient. Although a machine learning-based antidepressant response prediction model has been proposed to overcome this problem, the model cannot find the most effective antidepressant for a patient. Based on a neural network, we propose an Antidepressant Response Prediction Network (ARPNet) model capturing high-dimensional patterns from useful features. Based on a literature survey and data-driven feature selection, we extract useful features from patient data, and use the features as predictors. In ARPNet, the patient representation layer captures patient features and the antidepressant prescription representation layer captures antidepressant features. Utilizing the patient and antidepressant prescription representation vectors, ARPNet predicts the degree of antidepressant response. The experimental evaluation results demonstrate that our proposed ARPNet model outperforms machine learning-based models in predicting antidepressant response. Moreover, we demonstrate the applicability of ARPNet in downstream applications in use case scenarios.

Indexed as

Neural Networks, ComputerSoftwareAntidepressive AgentsDrug ResistanceHumansMajor Depressive DisorderTreatment OutcomeAntidepressive Agentsantidepressant response predictionmajor depressive disorderneural networkpatient representation

Identifiers

PMID31703457
PMCPMC6895829

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.