Evidence map›Paper›PMID 31699989›Full record

ArticleNature communications2019

Tissue-specific microRNA expression alters cancer susceptibility conferred by a TP53 noncoding variant.

Qipan Deng, Hui Hu, Xinfang Yu, Shuanglin Liu, Lei Wang, Weiqun Chen, Chi Zhang, Zhaoyang Zeng, Ya Cao, Zijun Y Xu-Monette and 8 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
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  8. Article
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  13. Molecular Pathology of Lung Cancer.Cold Spring Harbor perspectives in medicine · 2022
    Review
  14. Article
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  19. Article
  20. miRNA-based biomarkers, therapies, and resistance in Cancer.International journal of biological sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 4 countries.

Qipan DengDepartment of Medicine, Section of Epidemiology and Population Sciences, Baylor College of Medicine, Houston, TX, USA.
Hui HuDepartment of Cancer Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Xinfang YuDepartment of Medicine, Section of Epidemiology and Population Sciences, Baylor College of Medicine, Houston, TX, USA.
Shuanglin LiuDepartment of Medicine, Section of Epidemiology and Population Sciences, Baylor College of Medicine, Houston, TX, USA.
Lei WangDepartment of Cancer Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Weiqun ChenDepartment of Medical Laboratory, Central Hospital of Wuhan, Wuhan, China.
Chi ZhangDepartment of Medical Laboratory, Central Hospital of Wuhan, Wuhan, China.
Zhaoyang ZengDepartment of Cancer Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Ya CaoKey Laboratory of Carcinogenesis and Invasion, Ministry of Education, Xiangya Hospital; Cancer Research Institute, Xiangya School of Medicine, Central South University; Key Laboratory of Carcinogenesis, Chinese Ministry of Health, Changsha, China.
Zijun Y Xu-MonetteDepartment of Pathology, Division of Hematopathology, Duke University Medical Center, Durham, NC, USA.
Ling LiDepartment of Oncology, the First Affiliated Hospital of Zhengzhou University; Lymphoma Diagnosis and Treatment Center of Henan Province, Zhengzhou, China.
Mingzhi ZhangDepartment of Oncology, the First Affiliated Hospital of Zhengzhou University; Lymphoma Diagnosis and Treatment Center of Henan Province, Zhengzhou, China.
Steven RosenfeldDepartment of Cancer Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Shideng BaoDepartment of Cancer Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Eric HsiRobert J. Tomsich Pathology and Laboratory Medicine Institute, Cleveland Clinic, Cleveland, OH, USA.
Ken H YoungDepartment of Pathology, Division of Hematopathology, Duke University Medical Center, Durham, NC, USA.
Zhongxin LuDepartment of Medical Laboratory, Central Hospital of Wuhan, Wuhan, China. lzx71@yahoo.com.
Yong LiDepartment of Medicine, Section of Epidemiology and Population Sciences, Baylor College of Medicine, Houston, TX, USA. yong.li@bcm.edu.
Cleveland Clinic Lerner College of Medicine · USCentral Hospital of Wuhan · CNDuke Medical Center · USFirst Affiliated Hospital of Zhengzhou University · CNBaylor College of Medicine · USCleveland Clinic · USMinistry of Education · SA

Funding

Women's Cancer Research ProgramP30CA014236 · NCI · DUKE UNIVERSITY · PI DONNA NIEDZWIECKI · 1985 to 2026
$174.8M
Convergence of MicroRNAs and p53 Signaling in Multiple Myeloma: Environmental CoR01CA138688 · NCI · UNIVERSITY OF LOUISVILLE · PI LI, YONG · 2009 to 2017
$2.9M
TP53 Germline Mutations: Beyond LFSR01CA219556 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI LI, YONG · 2018 to 2022
$1.8M
Dietary Carcinogens for Colorectal CancerR01CA229080 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI LI, YONG · 2018 to 2022
$1.8M
NCI NIH HHS P30 CA014236NCI NIH HHS R01 CA138688NCI NIH HHS R01 CA219556NCI NIH HHS R01 CA229080
6 · The paper itself

Abstract

A noncoding polymorphism (rs78378222) in TP53, carried by scores of millions of people, was previously associated with moderate risk of brain tumors and other neoplasms. We find a positive association between this variant and soft tissue sarcoma. In sharp contrast, it is protective against breast cancer. We generated a mouse line carrying this variant and found that it accelerates spontaneous tumorigenesis and glioma development, but strikingly, delays mammary tumorigenesis. The variant creates a miR-382-5p targeting site and compromises a miR-325-3p site. Their differential expression results in p53 downregulation in the brain, but p53 upregulation in the mammary gland of polymorphic mice compared to that of wild-type littermates. Thus, this variant is at odds with Li-Fraumeni Syndrome mutants in breast cancer predisposition yet consistent in glioma predisposition. Our findings elucidate an underlying mechanism of cancer susceptibility that is conferred by genetic variation and yet altered by microRNA expression.

Indexed as

AnimalsBrainBrain NeoplasmsBreast NeoplasmsCarcinogenesisDown-RegulationFemaleGenetic Predisposition to DiseaseGliomaHumansLi-Fraumeni SyndromeMammary Glands, HumanMammary Neoplasms, ExperimentalMiceMicroRNAsSarcomamicroRNA 382, mouseMicroRNAsTP53 protein, humanTrp53 protein, mouseTumor Suppressor Protein p53

Identifiers

PMID31699989
PMCPMC6838078
OpenAlexW2983955741

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.