Evidence map›Paper›PMID 31698749›Full record

ArticleGenes2019

Evolution of Codon Usage Bias in Diatoms.

Marc Krasovec, Dmitry A Filatov

Abstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Evolution and Expression of the Expansin Genes in Emmer Wheat.International journal of molecular sciences · 2023
    Article
  5. Comprehensive analysis of codon bias in 13Frontiers in microbiology · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Marc KrasovecDepartment of Plant Sciences, University of Oxford, Oxford OX1 3RB, UK.
Dmitry A FilatovDepartment of Plant Sciences, University of Oxford, Oxford OX1 3RB, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/P009808/1
6 · The paper itself

Abstract

Codon usage bias (CUB)-preferential use of one of the synonymous codons, has been described in a wide range of organisms from bacteria to mammals, but it has not yet been studied in marine phytoplankton. CUB is thought to be caused by weak selection for translational accuracy and efficiency. Weak selection can overpower genetic drift only in species with large effective population sizes, such as

Indexed as

Biological EvolutionCodonCodon UsageDiatomsEvolution, MolecularMutationSelection, GeneticCodoncodon biascodon usagediatomseffective population sizephytoplankton evolution

Identifiers

PMID31698749
PMCPMC6896221

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.