Evidence map›Paper›PMID 31697674›Full record

ArticlePLoS genetics2019

The genetic architecture of helminth-specific immune responses in a wild population of Soay sheep (Ovis aries).

Alexandra M Sparks, Kathryn Watt, Rona Sinclair, Jill G Pilkington, Josephine M Pemberton, Tom N McNeilly, Daniel H Nussey, Susan E Johnston

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Detection distribution of CNVs ofFrontiers in veterinary science · 2023
    Article
  7. Effects of Genetic Variation of the Sorting Nexin 29 (Animals : an open access journal from MDPI · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Examining adaptive evolution of immune activity: opportunities provided by gastropods in the age of 'omics'.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Review
  14. Article
  15. C-Type Lectins in Veterinary Species: Recent Advancements and Applications.International journal of molecular sciences · 2020
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Alexandra M SparksInstitutes of Evolutionary Biology and Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0002-7697-4632
Kathryn WattInstitutes of Evolutionary Biology and Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom.
Rona SinclairInstitutes of Evolutionary Biology and Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0002-1698-6295
Jill G PilkingtonInstitutes of Evolutionary Biology and Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom.
Josephine M PembertonInstitutes of Evolutionary Biology and Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0002-0075-1504
Tom N McNeillyMoredun Research Institute, Pentlands Science Park, Bush Loan, Midlothian, United Kingdom.ORCID 0000-0001-6469-0512
Daniel H NusseyInstitutes of Evolutionary Biology and Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom.
Susan E JohnstonInstitutes of Evolutionary Biology and Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0002-5623-8902
Centre for Immunity, Infection and Evolution · GBMoredun Research Institute · GBUniversity of Leeds · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H021868/1Medical Research Council 1369297
6 · The paper itself

Abstract

Much of our knowledge of the drivers of immune variation, and how these responses vary over time, comes from humans, domesticated livestock or laboratory organisms. While the genetic basis of variation in immune responses have been investigated in these systems, there is a poor understanding of how genetic variation influences immunity in natural, untreated populations living in complex environments. Here, we examine the genetic architecture of variation in immune traits in the Soay sheep of St Kilda, an unmanaged population of sheep infected with strongyle gastrointestinal nematodes. We assayed IgA, IgE and IgG antibodies against the prevalent nematode Teladorsagia circumcincta in the blood plasma of > 3,000 sheep collected over 26 years. Antibody levels were significantly heritable (h2 = 0.21 to 0.57) and highly stable over an individual's lifespan. IgA levels were strongly associated with a region on chromosome 24 explaining 21.1% and 24.5% of heritable variation in lambs and adults, respectively. This region was adjacent to two candidate loci, Class II Major Histocompatibility Complex Transactivator (CIITA) and C-Type Lectin Domain Containing 16A (CLEC16A). Lamb IgA levels were also associated with the immunoglobulin heavy constant loci (IGH) complex, and adult IgE levels and lamb IgA and IgG levels were associated with the major histocompatibility complex (MHC). This study provides evidence of high heritability of a complex immunological trait under natural conditions and provides the first evidence from a genome-wide study that large effect genes located outside the MHC region exist for immune traits in the wild.

Indexed as

Immunity, InnateAnimalsAnimals, WildAntibodiesHelminthsImmunoglobulin AImmunoglobulin EImmunoglobulin GSheepStrongylida InfectionsAntibodiesImmunoglobulin AImmunoglobulin EImmunoglobulin G

Identifiers

PMID31697674
PMCPMC6863570
OpenAlexW2987634379

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.