Evidence map›Paper›PMID 31697400›Full record

ArticleProtein science : a publication of the Protein Society2020

Oligomerization of RIG-I and MDA5 2CARD domains.

Cassie M Zerbe, David J Mouser, James L Cole

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

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  12. Oligomerization of RIG-I and MDA5 2CARD domains.Protein science : a publication of the Protein Society · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Cassie M ZerbeDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut.
David J MouserDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut.
James L ColeDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut.ORCID 0000-0002-9028-8364
University of Connecticut · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The innate immune system is the first line of defense against invading pathogens. The retinoic acid-inducible gene I (RIG-I) like receptors (RLRs), RIG-I and melanoma differentiation-associated protein 5 (MDA5), are critical for host recognition of viral RNAs. These receptors contain a pair of N-terminal tandem caspase activation and recruitment domains (2CARD), an SF2 helicase core domain, and a C-terminal regulatory domain. Upon RLR activation, 2CARD associates with the CARD domain of MAVS, leading to the oligomerization of MAVS, downstream signaling and interferon induction. Unanchored K63-linked polyubiquitin chains (polyUb) interacts with the 2CARD domain, and in the case of RIG-I, induce tetramer formation. However, the nature of the MDA5 2CARD signaling complex is not known. We have used sedimentation velocity analytical ultracentrifugation to compare MDA5 2CARD and RIG-I 2CARD binding to polyUb and to characterize the assembly of MDA5 2CARD oligomers in the absence of polyUb. Multi-signal sedimentation velocity analysis indicates that Ub

Indexed as

Protein DomainsDEAD Box Protein 58HumansInterferon-Induced Helicase, IFIH1Protein MultimerizationReceptors, ImmunologicSignal TransductionDEAD Box Protein 58IFIH1 protein, humanInterferon-Induced Helicase, IFIH1Receptors, ImmunologicRIGI protein, humananalytical ultracentrifugationinnate immunityK63-linked polyubiquitinmulti-signal sedimentation velocityRIG-I-like receptors

Identifiers

PMID31697400
PMCPMC6954692
OpenAlexW2983440878

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.