Evidence map›Paper›PMID 31697328›Full record

ArticleMolecular biology and evolution2020

A Burst of Genetic Innovation in Drosophila Actin-Related Proteins for Testis-Specific Function.

Courtney M Schroeder, John R Valenzuela, Isabel Mejia Natividad, Glen M Hocky, Harmit S Malik

Open access · hybridAbstract read
In one paragraph

Article in Molecular biology and evolution, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Human-specific epigenomic states in spermatogenesis.Computational and structural biotechnology journal · 2024
    Article
  3. Review
  4. Review
  5. Article
  6. Giant Viruses Encode Actin-Related Proteins.Molecular biology and evolution · 2022
    Article
  7. Molecular Evolution across Mouse Spermatogenesis.Molecular biology and evolution · 2022
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Courtney M SchroederDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA.
John R ValenzuelaDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA.
Isabel Mejia NatividadDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA.
Glen M HockyDepartment of Chemistry, New York University, New York, NY.
Harmit S MalikDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA.
Fred Hutch Cancer Center · USHoward Hughes Medical Institute · USNew York University · USUniversity of Puget Sound · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Genetic Conflict Shapes Centromeres and HeterochromatinR01GM074108 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MALIK, HARMIT S. · 2005 to 2022
$6.1M
NCI NIH HHS P30 CA015704NIGMS NIH HHS R01 GM074108
6 · The paper itself

Abstract

Many cytoskeletal proteins perform fundamental biological processes and are evolutionarily ancient. For example, the superfamily of actin-related proteins (Arps) specialized early in eukaryotic evolution for diverse cellular roles in the cytoplasm and the nucleus. Despite its strict conservation across eukaryotes, we find that the Arp superfamily has undergone dramatic lineage-specific diversification in Drosophila. Our phylogenomic analyses reveal four independent Arp gene duplications that occurred in the common ancestor of the obscura group of Drosophila and have been mostly preserved in this lineage. All four obscura-specific Arp paralogs are predominantly expressed in the male germline and have evolved under positive selection. We focus our analyses on the divergent Arp2D paralog, which arose via a retroduplication event from Arp2, a component of the Arp2/3 complex that polymerizes branched actin networks. Computational modeling analyses suggest that Arp2D can replace Arp2 in the Arp2/3 complex and bind actin monomers. Together with the signature of positive selection, our findings suggest that Arp2D may augment Arp2's functions in the male germline. Indeed, we find that Arp2D is expressed during and following male meiosis, where it localizes to distinct locations such as actin cones-specialized cytoskeletal structures that separate bundled spermatids into individual mature sperm. We hypothesize that this unprecedented burst of genetic innovation in cytoskeletal proteins may have been driven by the evolution of sperm heteromorphism in the obscura group of Drosophila.

Indexed as

Actin-Related Protein 2-3 ComplexActinsAnimalsDrosophilaDrosophila ProteinsEvolution, MolecularGene DuplicationGene Expression RegulationMaleMeiosisModels, MolecularMolecular Dynamics SimulationOrgan SpecificityPhylogenyTestisActin-Related Protein 2-3 ComplexActinsDrosophila Proteinscell biologycytoskeletonmolecular dynamic simulationspositive selectionsperm

Identifiers

PMID31697328
PMCPMC7038667
OpenAlexW2987290629

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.