Evidence map›Paper›PMID 31696992›Full record

ArticleHuman mutation2020

Digenic inheritance of human primary microcephaly delineates centrosomal and non-centrosomal pathways.

Sarah Duerinckx, Valérie Jacquemin, Séverine Drunat, Yoann Vial, Sandrine Passemard, Camille Perazzolo, Annick Massart, Julie Soblet, Judith Racapé, Laurence Desmyter and 12 more

Open access · hybridAbstract read
In one paragraph

Article in Human mutation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

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  7. Expanding the Phenotype ofJournal of clinical research in pediatric endocrinology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 3 countries.

Sarah DuerinckxInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.ORCID 0000-0003-2919-0664
Valérie JacqueminInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.
Séverine DrunatDepartment of Genetics, Robert Debré University Hospital, APHP, Paris, France.
Yoann VialDepartment of Genetics, Robert Debré University Hospital, APHP, Paris, France.ORCID 0000-0003-1437-0427
Sandrine PassemardDepartment of Genetics, Robert Debré University Hospital, APHP, Paris, France.ORCID 0000-0002-0242-4566
Camille PerazzoloInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.
Annick MassartInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.
Julie SobletInteruniversity Institute of Bioinformatics in Brussels, Université Libre de Bruxelles-Vrije Universiteit Brussel, Brussels, Belgium.
Judith RacapéFaculty of Medicine, Université Libre de Bruxelles, Brussels, Belgium.
Laurence DesmyterDepartment of Genetics, ULB Center of Human Genetics, Hôpital Erasme, Université Libre de Bruxelles, Brussels, Belgium.
Cindy BadoerDepartment of Genetics, ULB Center of Human Genetics, Hôpital Erasme, Université Libre de Bruxelles, Brussels, Belgium.
Sofia PapadimitriouInteruniversity Institute of Bioinformatics in Brussels, Université Libre de Bruxelles-Vrije Universiteit Brussel, Brussels, Belgium.
Yann-Aël Le BorgneMachine Learning Group, Université Libre de Bruxelles, Brussels, Belgium.
Anne LefortInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.
Frédérick LibertInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.
Viviane De MaertelaerInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.
Marianne RoomanComputational Biology and Bioinformatics, Université Libre de Bruxelles, Brussels, Belgium.
Sabine CostagliolaInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.
Alain VerloesDepartment of Genetics, Robert Debré University Hospital, APHP, Paris, France.
Tom LenaertsInteruniversity Institute of Bioinformatics in Brussels, Université Libre de Bruxelles-Vrije Universiteit Brussel, Brussels, Belgium.
Isabelle PirsonInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.
Marc AbramowiczInstitut de Recherche Interdisciplinaire en Biologie Humaine et Moléculaire, Université Libre de Bruxelles, Brussels, Belgium.ORCID 0000-0003-0623-8768
Université Libre de Bruxelles · BEInserm · FRUniversity of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Primary microcephaly (PM) is characterized by a small head since birth and is vastly heterogeneous both genetically and phenotypically. While most cases are monogenic, genetic interactions between Aspm and Wdr62 have recently been described in a mouse model of PM. Here, we used two complementary, holistic in vivo approaches: high throughput DNA sequencing of multiple PM genes in human patients with PM, and genome-edited zebrafish modeling for the digenic inheritance of PM. Exomes of patients with PM showed a significant burden of variants in 75 PM genes, that persisted after removing monogenic causes of PM (e.g., biallelic pathogenic variants in CEP152). This observation was replicated in an independent cohort of patients with PM, where a PM gene panel showed in addition that the burden was carried by six centrosomal genes. Allelic frequencies were consistent with digenic inheritance. In zebrafish, non-centrosomal gene casc5 -/- produced a severe PM phenotype, that was not modified by centrosomal genes aspm or wdr62 invalidation. A digenic, quadriallelic PM phenotype was produced by aspm and wdr62. Our observations provide strong evidence for digenic inheritance of human PM, involving centrosomal genes. Absence of genetic interaction between casc5 and aspm or wdr62 further delineates centrosomal and non-centrosomal pathways in PM.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseInheritance PatternsAnimalsCentrosomeDatabases, GeneticExome SequencingHumansMicrocephalyMutationOpen Reading FramesPhenotypeSignal TransductionZebrafishcomplex inheritancedigenic inheritanceexome sequencingprimary microcephalyzebrafish

Identifiers

PMID31696992
PMCPMC7496698
OpenAlexW2986011691

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.