Evidence map›Paper›PMID 31695703›Full record

ArticleFrontiers in immunology2019

TCR Fingerprinting and Off-Target Peptide Identification.

Armen R Karapetyan, Chawaree Chaipan, Katharina Winkelbach, Sandra Wimberger, Jun Seop Jeong, Bishnu Joshi, Robert B Stein, Dennis Underwood, John C Castle, Marc van Dijk and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 49 citations in OpenAlex.

  1. Machine learning-based prediction of cross-immunity.Briefings in bioinformatics · 2026
    Article
  2. Article
  3. CD8 co-receptor modulates the specificity profile of the 1G4 TCR against NY-ESO-1.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  4. A KRASMolecular therapy. Oncology · 2025
    Article
  5. Review
  6. Computational identification of cross-reactive TCR epitopes with ARDitox.Journal of cancer research and clinical oncology · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Armen R KarapetyanAgenus, Lexington, MA, United States.
Chawaree ChaipanAgenus, Lexington, MA, United States.
Katharina WinkelbachAgenus, Lexington, MA, United States.
Sandra WimbergerAgenus, Lexington, MA, United States.
Jun Seop JeongAgenus, Lexington, MA, United States.
Bishnu JoshiAgenus, Lexington, MA, United States.
Robert B SteinAgenus, Lexington, MA, United States.
Dennis UnderwoodAgenus, Lexington, MA, United States.
John C CastleAgenus, Lexington, MA, United States.
Marc van DijkAgenus, Lexington, MA, United States.
Volker SeibertAgenus, Lexington, MA, United States.
Agenus (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adoptive T cell therapy using patient T cells redirected to recognize tumor-specific antigens by expressing genetically engineered high-affinity T-cell receptors (TCRs) has therapeutic potential for melanoma and other solid tumors. Clinical trials implementing genetically modified TCRs in melanoma patients have raised concerns regarding off-target toxicities resulting in lethal destruction of healthy tissue, highlighting the urgency of assessing which off-target peptides can be recognized by a TCR. As a model system we used the clinically efficacious NY-ESO-1-specific TCR C

Indexed as

Biological AssayLymphocyte ActivationCell Line, TumorEpitopes, T-LymphocyteHEK293 CellsHumansPeptidesReceptors, AntigenT-LymphocytesEpitopes, T-LymphocytePeptidesReceptors, Antigencross-reactive peptidesMHC class INY-ESOc259off-target predictionT cell receptor

Identifiers

PMID31695703
PMCPMC6817589
OpenAlexW2981395002

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.