Evidence map›Paper›PMID 31695490›Full record

ArticleCancer management and research2019

A Multi-Element Expression Score Is A Prognostic Factor In Glioblastoma Multiforme.

Jun-Qi Li, Qian-Ting Wang, Ying Nie, Yun-Peng Xiao, Tao Lin, Ru-Jin Han, Zhe Li, Yu-Ying Fan, Xiao-Hui Yuan, Yue-Ming Wang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cancer management and research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Jun-Qi Li *Department of Cell Biology and Institute of Biomedicine, College of Life Science and Technology, Jinan University, National Engineering Research Center of Genetic Medicine, Guangzhou 510632, People's Republic of China.
Qian-Ting Wang *Department of Cell Biology and Institute of Biomedicine, College of Life Science and Technology, Jinan University, National Engineering Research Center of Genetic Medicine, Guangzhou 510632, People's Republic of China.
Ying NieGuangdong 999 Brain Hospital, Guangzhou 510510, People's Republic of China.
Yun-Peng XiaoGuangzhou Trinomab Biotechnology Co., Ltd, Guangzhou 510632, People's Republic of China.
Tao LinGuangdong 999 Brain Hospital, Guangzhou 510510, People's Republic of China.
Ru-Jin HanGuangdong 999 Brain Hospital, Guangzhou 510510, People's Republic of China.
Zhe LiGuangdong 999 Brain Hospital, Guangzhou 510510, People's Republic of China.
Yu-Ying FanGuangdong 999 Brain Hospital, Guangzhou 510510, People's Republic of China.
Xiao-Hui YuanDepartment of Cell Biology and Institute of Biomedicine, College of Life Science and Technology, Jinan University, National Engineering Research Center of Genetic Medicine, Guangzhou 510632, People's Republic of China.
Yue-Ming WangZhuhai Trinomab Biotechnology Co., Ltd., Zhuhai 519040, People's Republic of China.
Jian ZhangGuangdong 999 Brain Hospital, Guangzhou 510510, People's Republic of China.
You-Wen HeDepartment of Immunology, Duke University Medical Center, Durham, NC 27710, USA.ORCID 0000-0002-8983-2684
Hua-Xin LiaoDepartment of Cell Biology and Institute of Biomedicine, College of Life Science and Technology, Jinan University, National Engineering Research Center of Genetic Medicine, Guangzhou 510632, People's Republic of China.ORCID 0000-0002-7871-1334
Guangdong 999 Brain Hospital · CNJinan University · CNDuke Medical Center · USGuangzhou Experimental Station · CNZhuhai People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeGlioblastoma multiforme (GBM) is a highly malignant tumor of the central nervous system. Although primary GBM patients receive extensive therapies, tumors may recur within months, and there is no objective and scientific method to predict prognosis. Adoptive immunotherapy holds great promise for GBM treatment. However, the expression profiles of the tumor-associated antigens (TAAs) and tumor immune microenvironment (TME) genes used in immunotherapy of GBM patients have not been fully described. The present study aimed to develop a predictive tool to evaluate patient survival based on full analysis of the expression levels of TAAs and TME genes.

methodsExpression profiles of a panel of 87 TAAs and 8 TME genes significantly correlated with poor prognosis were evaluated in 44 GBM patients and 10 normal brain tissues using quantitative real-time polymerase chain reaction (qRT-PCR). A linear formula (the LASSO algorithm based in the R package) weighted by regression coefficients was used to develop a multi-element expression score to predict prognosis; this formula was cross-validated by the leave-one-out method in different GBM cohorts.

resultsAfter analysis of gene expression, clinical features, and overall survival (OS), a total of 8 TAAs (CHI3L1, EZH2, TRIOBP, PCNA, PIK3R1, PRKDC, SART3 and EPCAM), 1 TME gene (FOXP3) and 4 clinical features (neutrophil-to-lymphocyte (NLR), number of basophils (BAS), age and treatment with standard radiotherapy and chemotherapy) were included in the formula. There were significant differences between high and low scoring groups identified using the formula in different GBM cohorts (TCGA (n=732) and GEO databases (n=84)), implying poor and good prognosis, respectively.

conclusionThe multi-element expression score was significantly associated with OS of GBM patients. The improve understanding of TAAs and TMEs and well-defined formula could be implemented in immunotherapy for GBM to provide better care.

Indexed as

gene expression scoreglioblastomaprognosisTAAsTME

Identifiers

PMID31695490
PMCPMC6805247
OpenAlexW2980518780

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.