Evidence map›Paper›PMID 31695241›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2018

Inter-scanner Variation Independent Descriptors for Constrained Diffeomorphic Demons Registration of Retina OCT.

S Reaungamornrat, A Carass, Y He, S Saidha, P A Calabresi, J L Prince

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Recurrent Self Fusion: Iterative Denoising for Consistent Retinal OCT Segmentation.Ophthalmic medical image analysis : 10th International Workshop, OMIA 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 12, 2023, Proceedings. OMIA (Workshop) (10th : 2023 : Vancouver, B.C. ; Online) · 2023
    Article
  3. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors.

S ReaungamornratDepartment of Neurology, Johns Hopkins Hospital, Baltimore, MD.
A CarassDepartment of Neurology, Johns Hopkins Hospital, Baltimore, MD.
Y HeDepartment of Neurology, Johns Hopkins Hospital, Baltimore, MD.
S SaidhaDepartment of Electrical and Computer Engineering, Johns Hopkins University, Baltimore MD.
P A CalabresiDepartment of Electrical and Computer Engineering, Johns Hopkins University, Baltimore MD.
J L PrinceDepartment of Neurology, Johns Hopkins Hospital, Baltimore, MD.

Funding

3D segmentation and registration of macular SD-OCT for application in MSR01EY024655 · NEI · JOHNS HOPKINS UNIVERSITY · PI PRINCE, JERRY L · 2014 to 2017
$1.6M
NEI NIH HHS R01 EY024655
6 · The paper itself

Abstract

purposeOCT offers high in-plane micrometer resolution, enabling studies of neurodegenerative and ocular-disease mechanisms via imaging of the retina at low cost. An important component to such studies is inter-scanner deformable image registration. Image quality of OCT, however, is suboptimal with poor signal-to-noise ratio and through-plane resolution. Geometry of OCT is additionally improperly defined. We developed a diffeomorphic deformable registration method incorporating constraints accommodating the improper geometry and a decentralized-modality-insensitive-neighborhood-descriptors (D-MIND) robust against degradation of OCT image quality and inter-scanner variability.

methodThe method, called D-MIND Demons, estimates diffeomorphisms using D-MINDs under constraints on the direction of velocity fields in a MIND-Demons framework. Descriptiveness of D-MINDs with/without denoising was ranked against four other shape/texture-based descriptors. Performance of D-MIND Demons and its variants incorporating other descriptors was compared for cross-scanner, intra- and inter-subject deformable registration using clinical retina OCT data.

resultD-MINDs outperformed other descriptors with the difference in mutual descriptiveness between high-contrast and homogenous regions > 0.2. Among Demons variants, D-MIND-Demons was computationally efficient, demonstrating robustness against OCT image degradation (noise, speckle, intensity-non-uniformity, and poor through-plane resolution) and consistent registration accuracy [(4±4 μm) and (4±6 μm) in cross-scanner intra- and inter-subject registration] regardless of denoising.

conclusionsA promising method for cross-scanner, intra- and inter-subject OCT image registration has been developed for ophthalmological and neurological studies of retinal structures. The approach could assist image segmentation, evaluation of longitudinal disease progression, and patient population analysis, which in turn, facilitate diagnosis and patient-specific treatment.

Indexed as

deformable image registrationDemons algorithmdescriptorsdiffeomorphismOCToptical coherence tomography

Identifiers

PMID31695241
PMCPMC6834339

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