Evidence map›Paper›PMID 31695138›Full record

ArticleScientific reports2019

The Combined Strategy for iron uptake is not exclusive to domesticated rice (Oryza sativa).

Andriele Wairich, Ben Hur Neves de Oliveira, Ezequiel Barth Arend, Guilherme Leitão Duarte, Lucas Roani Ponte, Raul Antonio Sperotto, Felipe Klein Ricachenevsky, Janette Palma Fett

Abstract readComparative Study
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
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  4. Further studies on pyramiding of alien genes for high grain Fe and Zn in bread wheat.Molecular breeding : new strategies in plant improvement · 2025
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  5. Article
  6. Review
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  10. Effect of the Nonpathogenic StrainPlants (Basel, Switzerland) · 2023
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Andriele WairichPrograma de Pós-Graduação em Biologia Celular e Molecular, Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.ORCID http://orcid.org/0000-0001-5440-9918
Ben Hur Neves de OliveiraPrograma de Pós-Graduação em Biologia Celular e Molecular, Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Ezequiel Barth ArendFaculdade de Agronomia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Guilherme Leitão DuartePrograma de Pós-Graduação em Biologia Celular e Molecular, Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Lucas Roani PonteDepartamento de Biologia, Centro de Ciências Naturais e Exatas, Universidade Federal de Santa Maria, Santa Maria, Brazil.ORCID http://orcid.org/0000-0002-4304-8608
Raul Antonio SperottoPrograma de Pós-Graduação em Biotecnologia, Universidade do Vale do Taquari - Univates, Lajeado, Brazil.ORCID http://orcid.org/0000-0003-1602-6101
Felipe Klein RicachenevskyPrograma de Pós-Graduação em Biologia Celular e Molecular, Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil. felipecruzalta@gmail.com.ORCID http://orcid.org/0000-0001-5429-3759
Janette Palma FettPrograma de Pós-Graduação em Biologia Celular e Molecular, Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil. jpfett@cbiot.ufrgs.br.ORCID http://orcid.org/0000-0002-2525-9807

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Iron (Fe) is an essential micronutrient that is frequently inaccessible to plants. Rice (Oryza sativa L.) plants employ the Combined Strategy for Fe uptake, which is composed by all features of Strategy II, common to all Poaceae species, and some features of Strategy I, common to non-Poaceae species. To understand the evolution of Fe uptake mechanisms, we analyzed the root transcriptomic response to Fe deficiency in O. sativa and its wild progenitor O. rufipogon. We identified 622 and 2,017 differentially expressed genes in O. sativa and O. rufipogon, respectively. Among the genes up-regulated in both species, we found Fe transporters associated with Strategy I, such as IRT1, IRT2 and NRAMP1; and genes associated with Strategy II, such as YSL15 and IRO2. In order to evaluate the conservation of these Strategies among other Poaceae, we identified the orthologs of these genes in nine species from the Oryza genus, maize and sorghum, and evaluated their expression profile in response to low Fe condition. Our results indicate that the Combined Strategy is not specific to O. sativa as previously proposed, but also present in species of the Oryza genus closely related to domesticated rice, and originated around the same time the AA genome lineage within Oryza diversified. Therefore, adaptation to Fe

Indexed as

Biological TransportCrops, AgriculturalGene Expression ProfilingGene Expression Regulation, PlantGene OntologyGenes, PlantIronOryzaPlant ProteinsPlant RootsSorghumSpecies SpecificityTranscriptomeZea maysIronPlant Proteins

Identifiers

PMID31695138
PMCPMC6834603

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.