Evidence map›Paper›PMID 31694916›Full record

ArticleThe Journal of biological chemistry2019

Primary cilia and the exocyst are linked to urinary extracellular vesicle production and content.

Xiaofeng Zuo, Sang-Ho Kwon, Michael G Janech, Yujing Dang, Steven D Lauzon, Ben Fogelgren, Noemi Polgar, Joshua H Lipschutz

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. The exocyst in ciliogenesis.Renal failure · 2025
    Review
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Patterns of Ciliation and Ciliary Signaling in Cancer.Reviews of physiology, biochemistry and pharmacology · 2023
    Review
  13. Article
  14. Shedding of ciliary vesicles at a glance.Journal of cell science · 2022
    Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Primary Cilia in the Skin: Functions in Immunity and Therapeutic Potential.Frontiers in cell and developmental biology · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Xiaofeng ZuoDepartment of Medicine, Medical University of South Carolina, Charleston, South Carolina 29425.
Sang-Ho KwonDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, Georgia 30912.
Michael G JanechDepartment of Biology, College of Charleston, Charleston, South Carolina 29424.
Yujing DangDepartment of Medicine, Medical University of South Carolina, Charleston, South Carolina 29425.
Steven D LauzonDepartment of Public Health Sciences, Medical University of South Carolina, Charleston, South Carolina 29425.
Ben FogelgrenDepartment of Anatomy, Biochemistry, and Physiology, University of Hawaii at Manoa, Honolulu, Hawaii 96813.
Noemi PolgarDepartment of Anatomy, Biochemistry, and Physiology, University of Hawaii at Manoa, Honolulu, Hawaii 96813.ORCID 0000-0002-8400-162X
Joshua H LipschutzDepartment of Medicine, Medical University of South Carolina, Charleston, South Carolina 29425 Lipschut@musc.edu.
Medical University of South Carolina · USUniversity of Hawaiʻi at Mānoa · USAugusta University · USCollege of Charleston · US

Funding

South Carolina Clinical & Translational Research Institute (SCTR)UL1TR001450 · NCATS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T., FLUME, PATRICK A · 2015 to 2024
$41.1M
TRPA1 Physiology in Diabetes, Metabolic Syndrome, and MetabolismP20GM113134 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI Kathryn Jaques Schunke · 2017 to 2026
$21.5M
UAB Recessive PKD Research and Translational Core CenterP30DK074038 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YODER, BRADLEY K. · 2005 to 2019
$16.6M
Transgenic Mouse, ICSI and IVF CoreP20GM103457 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI WARD, WILLIAM S · 2012 to 2018
$12.9M
Translational Pilot Project ProgramP30GM131944 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI WARD, WILLIAM S · 2019 to 2023
$5.9M
Regulation of exosome release and its role in acute kidney injury.R01DK120510 · NIDDK · AUGUSTA UNIVERSITY · PI KWON, KENNETH · 2019 to 2023
$1.7M
The exocyst in ureter development and congenital obstructionsR01DK117308 · NIDDK · UNIVERSITY OF HAWAII AT MANOA · PI FOGELGREN, BENJAMIN C. · 2018 to 2020
$1.2M
The exocyst in kidney development and cyst formationK01DK087852 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI FOGELGREN, BENJAMIN C. · 2010 to 2014
$764k
A novel genetic model for congenital obstructive nephropathyR03DK100738 · NIDDK · UNIVERSITY OF HAWAII AT MANOA · PI FOGELGREN, BENJAMIN C. · 2014 to 2015
$152k
BLRD VA I01 BX000820NCATS NIH HHS UL1 TR001450NIDDK NIH HHS K01 DK087852NIDDK NIH HHS P30 DK074038NIDDK NIH HHS R01 DK117308NIDDK NIH HHS R01 DK120510NIDDK NIH HHS R03 DK100738NIGMS NIH HHS P20 GM103457NIGMS NIH HHS P20 GM113134NIGMS NIH HHS P30 GM131944
6 · The paper itself

Abstract

The recently proposed idea of "urocrine signaling" hypothesizes that small secreted extracellular vesicles (EVs) contain proteins that transmit signals to distant cells. However, the role of renal primary cilia in EV production and content is unclear. We previously showed that the exocyst, a highly conserved trafficking complex, is necessary for ciliogenesis; that it is present in human urinary EVs; that knockdown (KD) of exocyst complex component 5 (EXOC5), a central exocyst component, results in very short or absent cilia; and that human EXOC5 overexpression results in longer cilia. Here, we show that compared with control Madin-Darby canine kidney (MDCK) cells, EXOC5 overexpression increases and KD decreases EV numbers. Proteomic analyses of isolated EVs from EXOC5 control, KD, and EXOC5-overexpressing MDCK cells revealed significant alterations in protein composition. Using immunoblotting to specifically examine the expression levels of ADP-ribosylation factor 6 (ARF6) and EPS8-like 2 (EPS8L2) in EVs, we found that EXOC5 KD increases ARF6 levels and decreases EPS8L2 levels, and that EXOC5 overexpression increases EPS8L2. Knockout of intraflagellar transport 88 (IFT88) confirmed that the changes in EV number/content were due to cilia loss: similar to EXOC5, the IFT88 loss resulted in very short or absent cilia, decreased EV numbers, increased EV ARF6 levels, and decreased Eps8L2 levels compared with IFT88-rescued EVs. Compared with control animals, urine from proximal tubule-specific EXOC5-KO mice contained fewer EVs and had increased ARF6 levels. These results indicate that perturbations in exocyst and primary cilia affect EV number and protein content.

Indexed as

ExocytosisADP-Ribosylation Factor 6AnimalsCells, CulturedCiliaDogsExtracellular VesiclesHumansKidneyMadin Darby Canine Kidney CellsMiceMice, KnockoutVesicular Transport ProteinsADP-Ribosylation Factor 6ARF6 protein, humanArf6 protein, mouseEXOC5 protein, humanVesicular Transport Proteinsciliaexocytosisextracellular vesicleskidneyprotein export

Identifiers

PMID31694916
PMCPMC6916495
OpenAlexW2984931022

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.