Evidence map›Paper›PMID 31694368›Full record

ArticleAnalytical chemistry2019

Flow-Encoded Oxygen Control to Track the Time-Dependence of Molecular Changes Induced by Static or Cycling Hypoxia.

Ming Yao, Zahid N Rabbani, Tyler Sattler, Khue G Nguyen, David A Zaharoff, Glenn Walker, Michael P Gamcsik

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ming YaoDepartment of Mechanical and Aerospace Engineering , North Carolina State University , Raleigh , North Carolina 27695 , United States.
Zahid N RabbaniUNC/NCSU Joint Department of Biomedical Engineering , Raleigh , North Carolina 27695 , United States.
Tyler SattlerUNC/NCSU Joint Department of Biomedical Engineering , Raleigh , North Carolina 27695 , United States.
Khue G NguyenUNC/NCSU Joint Department of Biomedical Engineering , Raleigh , North Carolina 27695 , United States.
David A ZaharoffUNC/NCSU Joint Department of Biomedical Engineering , Raleigh , North Carolina 27695 , United States.
Glenn WalkerUNC/NCSU Joint Department of Biomedical Engineering , Raleigh , North Carolina 27695 , United States.
Michael P GamcsikUNC/NCSU Joint Department of Biomedical Engineering , Raleigh , North Carolina 27695 , United States.ORCID 0000-0002-0676-0110
UNC/NCSU Joint Department of Biomedical Engineering · USNorth Carolina State University · US

Funding

High-Throughput Screening Under Static or Dynamic HypoxiaR21CA202804 · NCI · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI GAMCSIK, MICHAEL · 2016 to 2018
$574k
NCI NIH HHS R21 CA202804
6 · The paper itself

Abstract

Detecting the effects of low oxygen on cell function is often dependent on monitoring the expression of a number of hypoxia markers. The time dependence of the appearance and stability of these markers varies between cell lines. Assessing cellular marker dynamics is also critical to determining how quickly cells respond to transient changes in oxygen levels that occurs with cycling hypoxia. We fabricated a manifold designed to use flow-encoding to produce sequential changes in gas mixtures delivered to a permeable-bottom 96-well plate. We show how this manifold and plate design can be used to expose cells to either static or cycling hypoxic conditions for eight different time periods thereby facilitating the study of the time-response of cells to altered oxygen environments. Using this device, we monitored the time-dependence of molecular changes in human PANC-1 pancreatic carcinoma and Caco-2 colon adenocarcinoma cells exposed to increasing periods of static or cycling hypoxia. Using immunohistochemistry, both cell lines show detectable levels of the marker protein hypoxia-inducible factor-1α (HIF-1α) after 3 h of exposure to static hypoxia. Cycling hypoxia increased the expression level of HIF-1α compared to static hypoxia. Both static and cycling hypoxia also increased glucose uptake and aldehyde dehydrogenase activity. This new device offers a facile screening approach to determine the kinetics of cellular alterations under varying oxygen conditions.

Indexed as

Cell HypoxiaAldehyde DehydrogenaseCaco-2 CellsCell Line, TumorGlucoseHumansHypoxia-Inducible Factor 1, alpha SubunitOxygenPancreatic NeoplasmsTime FactorsAldehyde DehydrogenaseGlucoseHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitOxygen

Identifiers

PMID31694368
PMCPMC8294196
OpenAlexW2984690013

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.