Evidence map›Paper›PMID 31694163›Full record

ArticleInternational journal of molecular sciences2019

Lysozyme-Induced Transcriptional Regulation of TNF-α Pathway Genes in Cells of the Monocyte Lineage.

Alberta Bergamo, Marco Gerdol, Alberto Pallavicini, Samuele Greco, Isabelle Schepens, Romain Hamelin, Florence Armand, Paul J Dyson, Gianni Sava

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Spatial transcriptomics reveals prognostically LYZCancer immunology, immunotherapy : CII · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Regulation of Lysozyme Activity by Human HormonesIranian biomedical journal · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. The Deletion of IL-17A EnhancesJournal of inflammation research · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Alberta BergamoCallerio Foundation Onlus, 34127 Trieste, Italy.
Marco GerdolDepartment of Life Sciences, University of Trieste, 34127 Trieste, Italy.ORCID 0000-0001-6411-0813
Alberto PallaviciniDepartment of Life Sciences, University of Trieste, 34127 Trieste, Italy.
Samuele GrecoDepartment of Life Sciences, University of Trieste, 34127 Trieste, Italy.ORCID 0000-0003-3435-2656
Isabelle SchepensProteomics Core Facility, Ecole Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland.
Romain HamelinProteomics Core Facility, Ecole Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland.
Florence ArmandProteomics Core Facility, Ecole Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland.
Paul J DysonInstitut des Sciences et Ingénierie Chimique, Ecole Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland.
Gianni SavaCallerio Foundation Onlus, 34127 Trieste, Italy.ORCID 0000-0002-5138-6041
École Polytechnique Fédérale de Lausanne · CHUniversity of Trieste · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lysozyme is one of the most important anti-bacterial effectors in the innate immune system of animals. Besides its direct antibacterial enzymatic activity, lysozyme displays other biological properties, pointing toward a significant anti-inflammatory effect, many aspects of which are still elusive. Here we investigate the perturbation of gene expression profiles induced by lysozyme in a monocyte cell line in vitro considering a perspective as broad as the whole transcriptome profiling. The results of the RNA-seq experiment show that lysozyme induces transcriptional modulation of the TNF-α/IL-1β pathway genes in U937 monocytes. The analysis of transcriptomic profiles with IPA

Indexed as

Transcriptional ActivationTranscriptomeCell LineHumansInflammationInterleukin-1betaMonocytesMuramidaseSignal TransductionTumor Necrosis Factor-alphaInterleukin-1betaMuramidaseTumor Necrosis Factor-alphaIL-1βinflammationlysozymeproteome profilingRNA-sequencingTNF-αwhole transcriptome profiling

Identifiers

PMID31694163
PMCPMC6862675
OpenAlexW2984064714

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.