Evidence map›Paper›PMID 31693228›Full record

ArticleChemistry (Weinheim an der Bergstrasse, Germany)2020

Synthesis and Biological Activity of Short Interfering RNAs Having Several Consecutive Amide Internucleoside Linkages.

Venubabu Kotikam, Julien A Viel, Eriks Rozners

Open access · greenAbstract read
In one paragraph

Article in Chemistry (Weinheim an der Bergstrasse, Germany), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Synthesis and Properties of RNA Modified with Thioamide Internucleoside Linkage.Chembiochem : a European journal of chemical biology · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Venubabu KotikamDepartment of Chemistry, Binghamton University, Binghamton, New York, 13902, USA.
Julien A VielDepartment of Chemistry, Binghamton University, Binghamton, New York, 13902, USA.
Eriks RoznersDepartment of Chemistry, Binghamton University, Binghamton, New York, 13902, USA.ORCID http://orcid.org/0000-0001-7649-0040
Binghamton University · US

Funding

Chemical Approaches to Control the Function of Regulatory RNAsR35GM130207 · NIGMS · STATE UNIVERSITY OF NY,BINGHAMTON · PI ERIKS ROZNERS · 2019 to 2026
$3.7M
Amide-Modified RNA: Synthesis, Structure and Potential for RNA InterferenceR01GM071461 · NIGMS · STATE UNIVERSITY OF NY,BINGHAMTON · PI ROZNERS, ERIKS · 2007 to 2017
$3.2M
Division of Chemistry CHE-0922815NIGMS NIH HHS GM071461 and GM130207NIGMS NIH HHS R01 GM071461NIGMS NIH HHS R35 GM130207
6 · The paper itself

Abstract

The success of RNA interference (RNAi) as a research tool and potential therapeutic approach has reinvigorated interest in chemical modifications of RNA. Replacement of the negatively charged phosphates with neutral amides may be expected to improve bioavailability and cellular uptake of small interfering RNAs (siRNAs) critical for in vivo applications. In this study, we introduced up to seven consecutive amide linkages at the 3'-end of the guide strand of an siRNA duplex. Modified guide strands having four consecutive amide linkages retained high RNAi activity when paired with a passenger strand having one amide modification between its first and second nucleosides at the 5'-end. Further increase in the number of modifications decreased the RNAi activity; however, siRNAs with six and seven amide linkages still showed useful target silencing. While an siRNA duplex having nine amide linkages retained some silencing activity, the partial reduction of the negative charge did not enable passive uptake in HeLa cells. Our results suggest that further chemical modifications, in addition to amide linkages, are needed to enable cellular uptake of siRNAs in the absence of transfection agents.

Indexed as

AmidesHeLa CellsHumansNucleosidesPhosphatesRNA, Double-StrandedRNA InterferenceRNA, Small InterferingTransfectionAmidesNucleosidesPhosphatesRNA, Double-StrandedRNA, Small Interferingchemical modificationsinternucleoside amide linkagenucleic acidsRNARNA interference

Identifiers

PMID31693228
PMCPMC6980941
OpenAlexW2984089372

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.