Evidence map›Paper›PMID 31692917›Full record

ArticleInternational journal of medical sciences2019

Identifying circRNA-associated-ceRNA networks in retinal neovascularization in mice.

Manjing Cao, Lusi Zhang, Jiang-Hui Wang, Huilan Zeng, Yingqian Peng, Jingling Zou, Jingming Shi, Liwei Zhang, Yun Li, Shigeo Yoshida and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of medical sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. mInternational journal of medical sciences · 2023
    Article
  8. Review
  9. Article
  10. Emerging roles of circular RNAs in retinal diseases.Neural regeneration research · 2022
    Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Metabolomics Analyses of Mouse Retinas in Oxygen-Induced Retinopathy.Investigative ophthalmology & visual science · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Manjing CaoDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Lusi ZhangDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Jiang-Hui WangCentre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Victoria, Australia.
Huilan ZengDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Yingqian PengDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Jingling ZouDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Jingming ShiDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Liwei ZhangDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Yun LiDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Shigeo YoshidaDepartment of Ophthalmology, Kurume University School of Medicine, Kurume, Fukuoka 830-0011, Japan.
Luosheng TangDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Yedi ZhouDepartment of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha, Hunan 410011, China.
Central South University · CNSecond Xiangya Hospital of Central South University · CNHunan Provincial Center for Disease Control and Prevention · CNCentre for Eye Research Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retinal neovascularization is a complication which caused human vision loss severely. It has been shown that circular RNAs (circRNAs) play essential roles in gene regulation. However, circRNA expression profile and the underlying mechanisms in retinal neovascular diseases remain unclear. In the present study, we identified altered circRNAs in the retinas of oxygen-induced retinopathy (OIR) mouse model by microarray profiling. Microarray analysis revealed that 539 circRNAs were significantly altered in OIR retinas compared with controls. Among them, 185 up-regulated and 354 down-regulated circRNAs were identified. The expression levels of 4 altered circRNAs including mmu_circRNA_002573, mmu_circRNA_011180, mmu_circRNA_016108 and mmu_circRNA_22546 were validated by quantitative real-time reverse transcription-polymerase chain reaction (qRT-PCR). Bioinformatic analysis with validated circRNAs such as competing endogenous RNA (ceRNA) regulatory networks with Gene Ontology (GO) enrichment analysis demonstrated that qRT-PCR validated circRNAs were associated with cellular process, cell part and phosphoric ester hydrolase activity. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis demonstrated that MAPK signaling pathway and renin-angiotensin system were related to validated circRNAs, suggesting these pathways may participate in pathological angiogenesis. The results together suggested that circRNAs were aberrantly expressed in OIR retinas and may play potential roles in retinal neovascular diseases.

Indexed as

Gene Regulatory NetworksAnimalsComputational BiologyDisease Models, AnimalDown-RegulationGene Expression ProfilingHumansMAP Kinase Signaling SystemMiceOligonucleotide Array Sequence AnalysisOxygenReal-Time Polymerase Chain ReactionRenin-Angiotensin SystemRetinaRetinal NeovascularizationRNA, CircularOxygenRNA, Circularcircular RNA (circRNA)expression profilemicroarrayoxygen-induced retinopathyretinal neovascularization

Identifiers

PMID31692917
PMCPMC6818188
OpenAlexW2974953379

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.