Evidence map›Paper›PMID 31692451›Full record

ArticleAging2019

Systematic identification of lncRNA-based prognostic biomarkers for glioblastoma.

Mingdong Li, Shengrong Long, Jinqu Hu, Zan Wang, Chao Geng, Shaowu Ou

Abstract read
In one paragraph

Article in Aging, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Long Non-Coding RNAIranian journal of public health · 2024
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Disease markers · 2020
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mingdong LiDepartment of Neurosurgery, First Affiliated Hospital of China Medical University, Shenyang, China.
Shengrong LongDepartment of Neurosurgery, First Affiliated Hospital of China Medical University, Shenyang, China.
Jinqu HuDepartment of Neurosurgery, First Affiliated Hospital of China Medical University, Shenyang, China.
Zan WangDepartment of Neurosurgery, First Affiliated Hospital of China Medical University, Shenyang, China.
Chao GengDepartment of Neurosurgery, First Affiliated Hospital of China Medical University, Shenyang, China.
Shaowu OuDepartment of Neurosurgery, First Affiliated Hospital of China Medical University, Shenyang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glioblastoma (GBM), a primary malignant tumor of the central nervous system, has a very poor prognosis. Analysis of global GBM samples has revealed a variety of long non-coding RNAs (lncRNAs) associated with prognosis; nevertheless, there remains a lack of accurate prognostic markers. Using RNA-Seq, methylation, copy number variation (CNV), mutation and clinical follow-up data for GBM patients from The Cancer Genome Atlas, we performed univariate analysis, multi-cluster analysis, differential analysis of different subtypes of lncRNA and coding genes, weighted gene co-expression network analyses, gene set enrichment analysis, Kyoto Encyclopedia of Genes and Genomes analysis, Gene Ontology analysis, and lncRNA CNV analyses. Our analyses yielded five lncRNAs closely related to survival and prognosis for GBM. To verify the predictive role of these five lncRNAs on the prognosis of GBM patients, the corresponding RNA-seq data from Chinese Glioma Genome Atlas were downloaded and analyzed, and comparable results were obtained. The role of one lncRNA LINC00152 has been observed previously; the others are novel findings. Expression of these lncRNAs could become effective predictors of survival and potential prognostic biomarkers for patients with GBM.

Indexed as

Biomarkers, TumorBrain NeoplasmsCpG IslandsDatabases, GeneticDisease-Free SurvivalDNA Copy Number VariationsGene Expression ProfilingGene Expression Regulation, NeoplasticGene OntologyGene Regulatory NetworksGlioblastomaHumansKaplan-Meier EstimateMutationPrognosisRNA, Long NoncodingBiomarkers, TumorRNA, Long Noncodingcopy number alterationsfunctional modulesglioblastomalncRNAsprognostic biomarkers

Identifiers

PMID31692451
PMCPMC6874448

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.